Fig. 1: Profile of variants in the KOVA 2 dataset. | Experimental & Molecular Medicine

Fig. 1: Profile of variants in the KOVA 2 dataset.

From: A database of 5305 healthy Korean individuals reveals genetic and clinical implications for an East Asian population

Fig. 1

a Variant frequency by MAF according to variant status: coding and noncoding, known and novel. b The number of variants identified as the number of included KOVA 2 individuals was increased and is divided by the coding (left) and noncoding (right) status. c The nonsilent/silent (NS/S) ratio of coding variants by MAF. d The patterns of variant functionality predicted by different software according to MAF are divided by the coding (left) and noncoding (right) status. As each program produces scores with different scales, and each scoring system was converted to percentiles. e The PCA of KOVA 2 and the neighboring East Asian populations. CHB Han Chinese individuals from Beijing, CDX Chinese individuals Dai from Xishuangbanna, JPT Japanese individuals from Tokyo, CHS Han Chinese individuals from South China, and KHV Kinh individuals from Ho Chi Minh City. f Intron variant burden according to the relative (left) or absolute (right) distance from exons. The X-axis bins in c and d are the same as those in a.

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