Table 2 Publicly-available datasets utilized for analysis

From: Isoform-specific promotion of breast cancer tumorigenicity by TBX3 involves induction of angiogenesis

Project

Dataset

Reference (or link)

Angiogenesis

MsigDB (Broad Institute)

http://software.broadinstitute.org/gsea/index.jsp

Angiogenesis

PubAngioGen

(East China Normal University)

http://www.megabionet.org/aspd

Li et al. [76]

Angiogenesis

AngioDB

(Pusan National University)

Sohn et al. [77]

Angiogenesis

dbANGIO

(Memorial University of Newfoundland)

http://www.med.mun.ca/angio/

Savas et al. [78]

Isoform Analysis

ICGC (US Donors)

https://xenabrowser.net/datapages/

Isoform Analysis

TCGA breast cancer (BRCA)

https://portal.gdc.cancer.gov/projects/TCGA-BRCA

Isoform Analysis

TCGA BRCA grade information

Budczies et al. [27]

Isoform Analysis

GTEx (Genotype Tissue Expression)

https://xenabrowser.net/transcripts/