Table 1 List of oligonucleotides used for TRP-cation channel mRNA expression analyses in human etoposide-sensitive and -resistant WERI-Rb1 by qRT-PCR.

From: Ascorbate-induced oxidative stress mediates TRP channel activation and cytotoxicity in human etoposide-sensitive and -resistant retinoblastoma cells

Gene

Oligonucleotide sequence

Product size (bp)

Oligonucleotide efficiency

GenBank accession number

TRPA1_for

TGGACACCTTCTTCTTGCATT

103

1.0

NM_007332

TRPA1_rev

TCATCCATTTCATGCAGCAC

TRPC5_for

TGGTAACTGGTTCAACAACACC

99

1.0

NM_012471

TRPC5_rev

CTGTCAGCATTGCGTTCTG

RPS18_for

CTTCCACAGGAGGCCTACAC

82

1.0

NM_022551

RPS18_rev

CGCAAAATATGCTGGAACTTT

TRPM2_for

CGAGGACATCAGCAATAAGGT

75

0.836

NM_003307

TRPM2_rev

ATGGAGCCCGACCTCTTC

TRPM7_for

TTGACATTGCCAAAAATCATGT

66

1.0

NM_017672

TRPM7_rev

CTTGTTCCAAGGATCCAACC

TRPM8_for

GGTCCTGTACTCGCTGGTCT

67

1.0

NM_024080

TRPM8_rev

CACCCCATTTACGTACCACTG

TRPV1_for

CTACAGCAGCAGCGAGACC

71

0.899

NM_080704

TRPV1_rev

CCTGCAGGAGTCGGTTCA

TRPV4_for

CAACAACGACGGCCTCTC

74

1.0

NM_021625

TRPV4_rev

GGATGATGTGCTGAAAGATCC

  1. bp base pairs, for forward, rev reverse.
  2. The oligonucleotide sequence, predicted product size, oligonucleotide efficiency, and GenBank accession number are indicated. For relative quantification of mRNA levels, RPS18 served as reference gene.