Table 1 Hematological and cytogenetic features of all patients analyzed
From: A distinct epigenetic program underlies the 1;7 translocation in myelodysplastic syndromes
dic(1;7) cohort | |||||||
---|---|---|---|---|---|---|---|
Patient | Sex | Age | Diagnosis | Karyotype | mERRBS | RNA-seq | Mutationsa |
DIC 1 | M | 67 | MDS (ET, JAK2+) | 47,XY,+1,dic(1;7)(p10;q10),+9[15] | Yes | Yes | Not available |
DIC 2 | M | 75 | t-MDS (lung cancer) | 46,XY,+1,dic(1;7)(p11;q11)[14]/46,XY[1] | Yes | Yes | GGPS1 (R74H); ANKS1B (T247I) |
DIC 3 | F | 79 | t-MDS (NHL) | 46,XX,+1,dic(1;7)(p11;q11),del(13)(q13q31)[2]/47,idem,+8[8]/46,XX[2] | Yes | Yes | Not available |
DIC 4 | M | 42 | t-MDS (melanoma) | 46,XY,+1,dic(1;7)(q10;p10)[7]/46,XY[8] | Yes | Yes | Not available |
DIC 5 | M | 45 | MDS | 47,XY,+1,dic(1;7)(q10;p10),+8[20] | Yes | Yes | CCDC8 (R429K); PSMF1 (P168L) |
Control cohort | |||||||
CTL 1 | F | 43 | Wild type | 46,XX[20] | Yes | NA | Not found |
CTL 2 | M | 39 | Wild type | 46,XY[20] | Yes | Yes | Not found |
CTL 3 | F | 46 | Wild type | 46,XX[20] | Yes | Yes | Not found |
CTL 4 | M | 46 | Wild type | 46,XY[20] | Yes | Yes | Not found |
CTL 5 | F | 63 | Wild type | 46,XX[20] | NA | Yes | Not found |
t-MN cohort | |||||||
t-MN 1 | F | 77 | t-MDS (lymphoma) | 46,XX[20] | Yes | Yes | TET2 (P1115L*2); SF3B1 (K700E) |
t-MN 2 | F | 46 | t-MDS (NHL) | 51,XXX,del(4)(q13),−5,+6,+8,+11,−17,−18,+19,+22,+2mar[11]/46,XX[7] | Yes | Yes | TP53 (R273H) |
t-MN 3 | M | 70 | t-MDS (bowel carcinoma) | 46,X,-Y,t(1;10)(q21;q21),−5,der(7)(?),del(7q)(q11),+8,+19,−22+mar[15] | NA | Yes | TP53 (C135L*4) |
t-MN 4 | F | 80 | t-MDS (ovarian cancer) | 47,XX,+8[7]/46,XX[8] | Yes | Yes | Not found |
t-MN 5 | M | 77 | t-MDS (bladder cancer) | 43–45,XY,−5,del(7q)(q21q36),−9,add(12p)(p11),−13,+16,add(17)(p11),+19,del(21)(q?),+22[7] | NA | Yes | TP53 (M246R) |