Table 1 Recent large-scale efforts generating RNA-seq data to identify differential gene expression associated with schizophrenia in post-mortem human brains.

From: Comment on: What genes are differentially expressed in individuals with schizophrenia? A systematic review

Project

Cohorts

Brain Region

Details

Scz/Adult Control

Link

Refs.

BrainSeq

LIBD

Phase1: DLPFC

polyA+ RNA-seq.

155/196

eqtl.brainseq.org

[3]

Phase2: DLPFC

Ribo-Zero

153/226

[2]

HIPPO

RNA-seq

133/200

[2]

Jaffe, et al. (2020)

LIBD

dentate gyrus

RNA-seq of granule cell layer

75/93

research.libd.org/dg_hippo_paper/data.html

[9]

CommonMind Consortium

MSSM, Penn, Pitt, HBCC

DLPFC

Ribo-Zero RNA-seq

258/279

CommonMind.org

[8]

341/437

[6, 7]

PsychENCODE

CommonMind, LIBD, HBCC, UCLA_ASD, BrainGVEx

Cortex

RNA-seq includes CommonMind and LIBD data

559/936

resource.psychencode.org

[4, 5]

PsychENCODE

Stanley Medical Research Institute, Victorian Brain Bank, Pitt, Imperial College London, Harvard Brain Bank

Cortex

microarray

159/293

Ref [5]

[5]