Fig. 8 | Mucosal Immunology

Fig. 8

From: Two distinct colonic CD14+ subsets characterized by single-cell RNA profiling in Crohn’s disease

Fig. 8

Gene expression of selected discriminating genes of cluster E and F. Feature plots of key discriminating genes expressed in particular single-cell cluster, consisting of the t-SNE plot from Figure 6b on which is overlaid the gene expression level of selected markers for cluster E and F. Color scheme is according to log2(TPM + 1) expression value, with color gradient from purple (low) to yellow (high) expression. Violin plots illustrate expression level distribution of discriminating surface marker genes (y-axis, (log2(TPM + 1))) across each of the six identified clusters (x-axis). Genes overexpressed in (a) cluster E and (b) cluster F are depicted in feature plots and associated violin plots

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