Fig. 3 | Mucosal Immunology

Fig. 3

From: Single-cell RNA-sequencing identifies the developmental trajectory of C-Myc-dependent NK1.1 T-bet+ intraepithelial lymphocyte precursors

Fig. 3

C-myc regulates the induction of T-bet in unconventional T cells after TCR simulation. a Bar diagram shows C-myc mRNA expression (Mean ± SEM) of different thymocytes population from three 6–12-week-old TBGR mice performed by qPCR. Pre-gating is shown in Supplementary Fig. 1a. b C-myc mRNA expression for natural (TCRαβ+ or TCRγδ+ CD8αα+) and induced (TCRαβ+ CD8αβ+) IELs isolated from the small intestine of three 6–12-week-old TBGR mice and analyzed by qPCR. IELs were pre-gated for DAPICD45+CD4. c Dot plot shows flow cytometric analysis of thymocyte subsets from 6- to 12-week-old C-mycΔ/ΔCd4 mice and littermate C-mycfl/fl mice as controls. Further flow cytometric analysis of DN thymocytes (d) and NK1.1 IELPs (e) as in c. ce Bar diagrams represent percentages (left, Mean ± SEM) and absolute cells numbers (right, Mean ± SEM) of the respective thymocyte populations. f Histogram shows MFI of CD122 in thymic NK1.1CD122+T-bet IELPs as shown in e. g Flow cytometric analysis of BrdU incorporation in NK1.1 IELPs after 3 h of BrdU pulse labeling (contour plots) and bar diagram shows statistical analysis (Mean ± SEM) of BrdU+ subsets (right panel) of 2-week-old C-mycΔ/ΔCd4 mice and littermate C-mycfl/fl mice as controls for 5 mice per genotype. h Schematic model for the generation of bone marrow chimeras. i Representative dot plot shows flow cytometric analysis of different thymocyte populations from five OT-1 C-mycΔ/ΔCd4 bone marrow chimeras and C-mycfl/fll littermate controls. Cells were pre-gated on TCR Vα2 and numbers denote the percentage of cells in the gate (Mean ± SEM) of five mice per group. k Further flow cytometric analysis as in h for NK1.1 IELPs classified upon their CD122 and T-bet expression. j, l Bar diagrams show the percentage (Mean ± SEM) of the respective thymocyte subpopulation

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