Table 3 Predicted transcription factor binding sites (TFBS) and primers.

From: Regulatory role of Gpr84 in the switch of alveolar macrophages from CD11blo to CD11bhi status during lung injury process

Predicted STAT3-Cd14 sequence 1: TTCCAGGCAG/TGCCTGGAAT

TFBS

F-/R-

Sequence (5′→3′)

PCR length (bp)

1784/1793

Forward

TTGAGCTTTATTCTCTGCCTGGAA

110

Reverse

GCAATTTCCCACCGTTCAAATCC

Predicted STAT3-Cd14 sequence 2: TTCCAGGACA/GTCCTGGAAC

TFBS

F-/R-

Sequence (5′→3′)

PCR length (bp)

1430/1439

Forward

GACGGCAAACCTTGCTTCCCAAT

182

Reverse

AGAGGCAGGCCAGCTTGAGTTC

Predicted STAT3-Cd14 sequence 3: GTACAGGAAA/CCTTTTCCTGTACG

TFBS

F-/R-

Sequence (5′→3′)

PCR length (bp)

1968/1977

Forward

GTGAATCAATGGGACTGAGCAACA

112

Reverse

GTGCCAGGAGGATGACCTATGC

Predicted STAT3-Lbp sequence 1: TGCTAGGAAG/TCTGCTAGGAAGGCCT

TFBS

F-/R-

Sequence (5′→3′)

PCR length (bp)

1816/1825

Forward

GGCTGTGACCCTGAGTGAACCT

83

Reverse

TGCCTCTGCCAACCTTCTTGACT

Predicted STAT3-Lbp sequence 2: TTCCAGTAAT/TTACTGGAAA

TFBS

F-/R-

Sequence (5′→3′)

PCR length (bp)

275/284

Forward

GCAAGGGACTCTGGGATCTCAG

131

Reverse

CAGTAGGGATGGGCCTGTGTTT

Predicted STAT3-Lbp sequence 3: CTCTTGGAAG

TFBS

F-/R-

Sequence (5′→3′)

PCR length (bp)

646/655

Forward

TGTCACCAAACCAGACCCAGATG

80

Reverse

AATCTCACCTGCCAGCTCTCATC