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ZMYND8 promotes the Warburg effect and tumorigenesis through c-Myc activation in pancreatic cancer

Abstract

Pancreatic cancer (PC) is a digestive tract tumour with an extremely poor patient prognosis and prominent metabolic abnormalities. However, the molecular mechanisms underlying metabolic reprogramming in the progression of pancreatic cancer remain poorly understood. Here, we employed an epigenetic siRNA library to identify a crucial regulator, ZMYND8, which is involved in glycolysis in PC cells. ZMYND8 was frequently overexpressed in both PC tissues and cell lines, and its elevated expression was significantly correlated with poor overall survival in patients with PC. The high rates of glucose uptake and lactate secretion conferred by ZMYND8 revealed an abnormal activity of aerobic glycolysis in PC cells. Functional studies revealed that ZMYND8 significantly promoted the proliferation, migration and invasion of PC cells. Integrated analyses of CUT&Tag and RNA-seq data revealed that ZMYND8 may activate c-Myc transcriptional activity by modulating downstream epigenetic regulatory pathways. Proteomic profiling and coimmunoprecipitation (Co-IP) assays further demonstrated a direct physical interaction between ZMYND8 and c-Myc. Mechanistic studies revealed that ZMYND8 interacted with and activated c-Myc, thereby promoting the Warburg effect and facilitating PC cell malignancy. Moreover, in vivo studies revealed that overexpression of ZMYND8 resulted in accelerated tumour growth in PC xenografts, which was reversible through the knockdown of c-Myc or treatment with 2-deoxy-D-glucose. Collectively, our data suggest that ZMYND8 functions as a critical metabolic regulator in PC cells by tightly regulating c-Myc activity and may represent a promising novel therapeutic target for advanced pancreatic cancer treatment.

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Fig. 1: Epigenetic siRNA library screening revealed that ZMYND8 promotes glycolysis in PC tissues and cells.
Fig. 2: ZMYND8 enhances aerobic glycolysis in PC cells.
Fig. 3: ZMYND8 promotes the proliferation, migration, and invasion of PC cells.
Fig. 4: ZMYND8 interacts with c-Myc to promote PC glycolysis.
Fig. 5: ZMYND8 enhances the transcriptional activity of c-Myc.
Fig. 6: ZMYND8 promotes the malignant activities of PC cells by regulating aerobic glycolysis through c-Myc.
Fig. 7: ZMYND8 promotes PC tumour growth in vivo.
Fig. 8

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Data availability

The data supporting the findings of this study are available from the corresponding author upon reasonable request.

References

  1. Siegel RL, Giaquinto AN, Jemal A. Cancer statistics, 2024. CA Cancer J Clin. 2024;74:12–49.

    PubMed  Google Scholar 

  2. Bray F, Laversanne M, Sung H, Ferlay J, Siegel RL, Soerjomataram I, et al. Global cancer statistics 2022: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA Cancer J Clin. 2024;74:229–63.

    PubMed  Google Scholar 

  3. George B. Precision medicine and pancreatic cancer. Surg Oncol Clin N Am. 2021;30:693–708.

    Article  PubMed  Google Scholar 

  4. Buscail L, Bournet B, Cordelier P. Role of oncogenic KRAS in the diagnosis, prognosis and treatment of pancreatic cancer. Nat Rev Gastroenterol Hepatol. 2020;17:153–68.

    Article  CAS  PubMed  Google Scholar 

  5. Chen M, Cen K, Song Y, Zhang X, Liou YC, Liu P, et al. NUSAP1-LDHA-Glycolysis-Lactate feedforward loop promotes Warburg effect and metastasis in pancreatic ductal adenocarcinoma. Cancer Lett. 2023;567:216285.

    Article  CAS  PubMed  Google Scholar 

  6. Kant R, Manne RK, Anas M, Penugurti V, Chen T, Pan BS, et al. Deregulated transcription factors in cancer cell metabolisms and reprogramming. Semin Cancer Biol. 2022;86:1158–74.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Yang J, Ren B, Yang G, Wang H, Chen G, You L, et al. The enhancement of glycolysis regulates pancreatic cancer metastasis. Cell Mol Life Sci. 2020;77:305–21.

    Article  CAS  PubMed  Google Scholar 

  8. Vaupel P, Schmidberger H, Mayer A. The Warburg effect: essential part of metabolic reprogramming and central contributor to cancer progression. Int J Radiat Biol. 2019;95:912–9.

    Article  CAS  PubMed  Google Scholar 

  9. Hanahan D, Weinberg RA. Hallmarks of cancer: the next generation. Cell. 2011;144:646–74.

    Article  CAS  PubMed  Google Scholar 

  10. Sun K, Zhang X, Shi J, Huang J, Wang S, Li X, et al. Elevated protein lactylation promotes immunosuppressive microenvironment and therapeutic resistance in pancreatic ductal adenocarcinoma. J Clin Invest. 2025;135:e187024.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Ghosh K, Tang M, Kumari N, Nandy A, Basu S, Mall DP, et al. Positive regulation of transcription by human ZMYND8 through its association with P-TEFb complex. Cell Rep. 2018;24:2141–54 e2146.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Mukherjee S, Adhikary S, Gadad SS, Mondal P, Sen S, Choudhari R, et al. Suppression of poised oncogenes by ZMYND8 promotes chemo-sensitization. Cell Death Dis. 2020;11:1073.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Dou C, Mo H, Chen T, Liu J, Zeng Y, Li S, et al. ZMYND8 promotes the growth and metastasis of hepatocellular carcinoma by promoting HK2-mediated glycolysis. Pathol Res Pr. 2021;219:153345.

    Article  CAS  Google Scholar 

  14. Luo M, Bao L, Chen Y, Xue Y, Wang Y, Zhang B, et al. ZMYND8 is a master regulator of 27-hydroxycholesterol that promotes tumorigenicity of breast cancer stem cells. Sci Adv. 2022;8:eabn5295.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  15. Shen H, Xu W, Guo R, Rong B, Gu L, Wang Z, et al. Suppression of enhancer overactivation by a RACK7-histone demethylase complex. Cell. 2016;165:331–42.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  16. Scognamiglio R, Cabezas-Wallscheid N, Thier MC, Altamura S, Reyes A, Prendergast AM, et al. Myc depletion induces a pluripotent dormant state mimicking diapause. Cell. 2016;164:668–80.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Farrell AS, Joly MM, Allen-Petersen BL, Worth PJ, Lanciault C, Sauer D, et al. MYC regulates ductal-neuroendocrine lineage plasticity in pancreatic ductal adenocarcinoma associated with poor outcome and chemoresistance. Nat Commun. 2017;8:1728.

    Article  PubMed  PubMed Central  Google Scholar 

  18. Xia P, Zhang H, Lu H, Xu K, Jiang X, Jiang Y, et al. METTL5 stabilizes c-Myc by facilitating USP5 translation to reprogram glucose metabolism and promote hepatocellular carcinoma progression. Cancer Commun. 2023;43:338–64.

    Article  Google Scholar 

  19. Zhang H, Zhai X, Liu Y, Xia Z, Xia T, Du G, et al. NOP2-mediated m5C modification of c-Myc in an EIF3A-dependent manner to reprogram glucose metabolism and promote hepatocellular carcinoma progression. Research. 2023;6:0184.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  20. Wang H, Wang J, Liu J, Wang Y, Xia G, Huang X. Jumonji-C domain-containing protein 5 suppresses proliferation and aerobic glycolysis in pancreatic cancer cells in a c-Myc-dependent manner. Cell Signal. 2022;93:110282.

    Article  CAS  PubMed  Google Scholar 

  21. Cao Z, Budinich KA, Huang H, Ren D, Lu B, Zhang Z, et al. ZMYND8-regulated IRF8 transcription axis is an acute myeloid leukemia dependency. Mol Cell. 2021;81:3604–22 e3610.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  22. Kosti A, de Araujo PR, Li WQ, Guardia GDA, Chiou J, Yi C, et al. The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation. Genome Biol. 2020;21:195.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Gunda V, Souchek J, Abrego J, Shukla SK, Goode GD, Vernucci E, et al. MUC1-mediated metabolic alterations regulate response to radiotherapy in pancreatic cancer. Clin Cancer Res. 2017;23:5881–91.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  24. Hossain MA, Claggett JM, Edwards SR, Shi A, Pennebaker SL, Cheng MY, et al. Posttranscriptional regulation of Gcr1 expression and activity is crucial for metabolic adjustment in response to glucose availability. Mol Cell. 2016;62:346–58.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  25. Tang B, Sun R, Wang D, Sheng H, Wei T, Wang L, et al. ZMYND8 preferentially binds phosphorylated EZH2 to promote a PRC2-dependent to -independent function switch in hypoxia-inducible factor-activated cancer. Proc Natl Acad Sci USA. 2021;118:e2019052118.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  26. Fang Y, Tang W, Qu S, Li Z, Zhang X, Miao Y, et al. RBBP7, regulated by SP1, enhances the Warburg effect to facilitate the proliferation of hepatocellular carcinoma cells via PI3K/AKT signaling. J Transl Med. 2024;22:170.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  27. Chen Y, Tsai YH, Tseng SH. Regulation of ZMYND8 to treat cancer. Molecules. 2021;26:1083.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  28. Wang H, Sun J, Sun H, Wang Y, Lin B, Wu L, et al. The OGT-c-Myc-PDK2 axis rewires the TCA cycle and promotes colorectal tumor growth. Cell Death Differ. 2024;31:1157–69.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  29. Spruijt CG, Luijsterburg MS, Menafra R, Lindeboom RG, Jansen PW, Edupuganti RR, et al. ZMYND8 co-localizes with NuRD on target genes and regulates poly(ADP-Ribose)-dependent recruitment of GATAD2A/NuRD to sites of DNA damage. Cell Rep. 2016;17:783–98.

    Article  CAS  PubMed  Google Scholar 

  30. Chen Y, Zhang B, Bao L, Jin L, Yang M, Peng Y, et al. ZMYND8 acetylation mediates HIF-dependent breast cancer progression and metastasis. J Clin Invest. 2018;128:1937–55.

    Article  PubMed  PubMed Central  Google Scholar 

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Acknowledgements

We are grateful to the Doctors of Guizhou Medical University for their assistance with pancreatic cancer patient tissues collection.

Funding

This work was funded by the National Natural Science Foundation of China (No. 52273256) from KJ, Shenzhen Natural Science Fund (the Stable Support Plan Program (No. 20220810151804002)) from HL, Shenzhen Science and Technology Program (Grant No. RCBS20221008093107027) from ZH.

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Contributions

HL: Methodology, investigation, and writing original draft. HL, ZH and KJ: Methodology, investigation, and validation. HL, ZZ, CW: Investigation, and validation. HL, ZZ, CW and JC: Validation and formal analysis and resources and data curation. HL, ZH and KJ: Conceptualization, resources, writing-review & Editing, supervision, funding acquisition, and project administration.

Corresponding authors

Correspondence to Zhiwei He or Kai Jiang.

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The authors declare no competing interests.

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The approval of the Institutional Review Board at the Affiliated Hospital of Guizhou Medical University, Guizhou Medical University. All the animal studies were approved by the Shenzhen University Institutional Animal Care and Use Committee.

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Liu, H., Zhao, Z., Wu, C. et al. ZMYND8 promotes the Warburg effect and tumorigenesis through c-Myc activation in pancreatic cancer. Oncogene 44, 3083–3095 (2025). https://doi.org/10.1038/s41388-025-03483-0

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