Table 5 Top list of upregulated genes in retina and blood based on their expression fold change between OIR and control mice at different time points
Time point | Gene symbol | Log2FC | Corrected p-value | Gene name |
---|---|---|---|---|
Retina | ||||
P12 | Mri1 | 1.29 | 0.0338 | Methylthioribose-1-phosphate isomerase |
P17 | Esm1 | 49.02 | 1.3345E-11 | Endothelial cell-specific molecule 1 |
Edn2 | 18.60 | 1.8853E-5 | Endothelin-2 | |
Bcl3 | 16.71 | 1.4607E-8 | B-cell lymphoma 3 protein homolog | |
Apln | 16.05 | 3.7819E-9 | Apelin | |
C4b | 11.10 | 1.3346E-11 | Complement C4-B | |
Pcolce | 10.65 | 6.6323E-11 | Procollagen C-endopeptidase enhancer 1 | |
Cebpd | 10.47 | 1.9108E-8 | CCAAT/enhancer-binding protein delta | |
Adm | 9.68 | 7.5001E-11 | Adrenomedullin | |
Tnnt2 | 8.46 | 3.2014E-8 | Troponin T, cardiac muscle | |
Gfap | 8.06 | 7.0122E-6 | Glial fibrillary acidic protein | |
P28 | Bcl3 | 4.62 | 1.2942E-4 | B-cell lymphoma 3 protein homolog |
C4b | 4.17 | 2.9285E-7 | Complement C4-B | |
Lad1 | 3.92 | 0.0023 | Ladinin-1 | |
Apln | 3.92 | 0.0012 | Apelin | |
Pcolce | 3.64 | 2.0317E-4 | Procollagen C-endopeptidase enhancer 1 | |
Fgf2os | 3.22 | 0.0091 | Uncharacterized protein | |
Tnnt2 | 2.86 | 2.8065E-5 | Troponin T, cardiac muscle | |
Cebpd | 2.77 | 6.8232E-4 | CCAAT/enhancer-binding protein delta | |
Lyz1 | 2.64 | 0.0099 | Lysozyme C-1 | |
Glycam1 | 2.61 | 0.0187 | Glycosylation-dependent cell adhesion molecule 1 | |
Blood | ||||
P17 | Taf4 | 3.11 | 0.0403 | Transcription initiation factor TFIID |
Sec22a | 2.96 | 0.0195 | Vesicle-trafficking protein SEC22a | |
Trmt1l | 2.91 | 0.0195 | tRNA methyltransferase 1 -like protein | |
ND2 | 2.50 | 0.0070 | NADH-ubiquinone oxidoreductase chain 2 | |
Rrp1b | 2.32 | 0.0067 | Ribosomal RNA processing protein 1 homolog B | |
Trp53 | 2.25 | 6.9234E-4 | Cellular tumor antigen p53 | |
Fam20b | 2.23 | 0.0481 | Glycosaminoglycan xylosylkinase | |
Hmg20b | 1.98 | 0.0067 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related | |
Gbf1 | 1.66 | 0.0304 | Golgi-specific brefeldin A-resistance factor-1 | |
Mkln1 | 1.60 | 0.0354 | Muskelin |