Fig. 1: Immune cell identification in murine liver.
From: Immune landscape in liver of neonatal mice with phlebotomy-induced anemia
a Workflow of liver analysis from postnatal day (P)10 of control and anemic groups. b Bar plot showing the total number of detected immune cells and c total number of detected genes per cell type. d UMAP visualization identified eight major clusters of immune cells (1-Erythroid cells, 2-NK cells, 3-non-inflammatory macrophages, 4-monocytes, 5-neutrophils, 6-T-cells, 7-dendritic cells, and 8-B cells). Cell clusters were color-coded and annotated post hoc based on their transcriptional profile identities. e UMAP visualization of identified immune cell clusters in conditions of control and anemia. f Plot showing the identification of marker genes for each cell cluster, with the size of the dot corresponding to the percentage of cells within the cell population expressing the gene. The brightness of the color represents the average expression level across all cells within the cluster. g Feature plots showing the expression of the key marker genes of the eight immune cell types. h Violin plots depicting expression levels of key marker genes of each cluster in eight types of immune cells.
