Table 1 List of representative ST technologies
From: Clinical and translational values of spatial transcriptomics
Launch | Methods | Research group | Institute | Refs |
|---|---|---|---|---|
1996 | LCM | Lance Liotta | Laboratory of Pathology, National Cancer Institute, Room 2A33, Building 10, 9000 Rockville Pike, Bethesda, MD 20892, USA | |
1998 | smFISH | Robert Singer | Department of Anatomy and Structural Biology and Cell Biology. Albert Einstein College of Medicine. Bronx, NY 10A61. USA | |
2012 | RNAscope | Yuling Luo | Advanced Cell Diagnostics, Inc., 3960 Point Eden Way, Hayward, CA 94545 | |
2013 | ISS | Mats Neilsson | Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden | |
2014 | TIVA | James Eberwine | Department of Pharmacology, University of Pennsylvania, Philadelphia, Pennsylvania, USA | |
2014 | FISSEQ | George Church | Department of Genetics, Harvard Medical School, Boston, MA 02115, USA | |
2014 | seqFISH | Long Cai | Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California, USA | |
2014 | tomo-seq | Alexander van Oudenaarden | Hubrecht Institute, KNAW and University Medical Center Utrecht, Cancer Genomics Netherlands, 3584 CT Utrecht, the Netherlands | |
2015 | MERFISH | Xiaowei Zhuang | Howard Hughes Medical Institute, Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA. Department of Physics, Harvard University, Cambridge | |
2016 | ST | Joakim Lundeberg | Science for Life Laboratory, Division of Gene Technology, KTH Royal Institute of Technology, SE-106 91 Stockholm, Sweden. | |
2017 | Geo-seq | Naihe Jing | State Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, Shanghai, China | |
2017 | NICHE-seq | Ido Amit | Department of Immunology, Weizmann Institute of Science, Rehovot, Israel | |
2018 | BaristaSeq | Anthony Zador | Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA | |
2018 | ProximID | Alexander van Oudenaarden | Oncode Institute, Hubrecht Institute-KNAW (Royal Netherlands Academy of Arts and Sciences), Utrecht, the Netherlands | |
2018 | STARmap | Karl Deisseroth | Department of Bioengineering, Stanford University, Stanford, CA 94305, USA | |
2018 | osmFISH | Sten Linnarsson | Division of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden | |
2019 | seqFISH+ | Long Cai | Division of Biology and Biological Engineering, California Institute of Technology, Pasadena USA 911253 | |
2019 | Slide-seq | Evan Macosko | Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA | |
2019 | APEX-seq | Alice Ting | Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA | |
2019 | HDST | Patrik Ståhl | Science for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, Stockholm, Sweden | |
2020 | DSP | Joseph Beechem | NanoString Technologies, Inc., Seattle, WA, USA | |
2020 | DBiT-seq | Rong Fan | Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA | |
2021 | Slide-seqV2 | Fei Chen | Broad Institute of Harvard and MIT, Cambridge, MA, 02142 | |
2021 | Stereo-seq | Jian Wang | BGI-Shenzhen, Shenzhen 518103, China | |
2021 | Seq-Scope | Jun Lee | Department of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109, USA | |
2021 | BOLORAMIS | George Church | Department of Genetics, Harvard Medical School, Boston, MA 02115, USA | |
2021 | sci-Space | Cole Trapnell | Department of Genome Sciences, University of Washington, Seattle, WA, USA |
