Table 1 Summary statistics of assembled Chloroflexi genomic bins in SAR202 cluster

From: The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling

 

#contigs

GC%

length (Mb)

#CDS

% Completeness

Est. genome size range (Mb)

Metagenomic assembled genomes (MAGs)

 Caspian Sea (15, 40, and 150 m)

  Casp-chloro-G1

20

68

0.353

346

–

–

  Casp-chloro-G2

66

61

1.9

1775

69–89

2.1–2.75

  Casp-chloro-G3

60

56.1

1.36

1296

64–82

1.65–2.1

  Casp-chloro-G4

53

55.5

1.36

1301

61–77

1.8–2.2

 Aegean Sea (Ae2, 600 m)

  Ae2-chloro-G1

28

43.9

0.465

462

–

–

  Ae2-chloro-G2

45

44.2

0.615

605

–

–

  Ae2-chloro-G3

32

54.4

0.476

444

–

–

Ionian Sea (Io17, 3500 m)

  Io17-chloro-G1

40

55.1

0.875

855

46–68

1.3–1.9

  Io17-chloro-G2

50

58.7

1.56

1401

64–79

1.97–2.4

  Io17-chloro-G3*

100

47.5

2.4

2319

84–93

2.6–2.8

  Io17-chloro-G4

69

55.7

1.9

1767

71–88

2.2–2.7

  Io17-chloro-G5

44

57

1.55

1449

61–79

1.97–2.5

  Io17-chloro-G6

49

58.3

2.2

2076

74–91

2.4–2.9

  Io17-chloro-G7

74

54.8

1.45

1277

57–79

1.8–2.5

  Io17-chloro-G8

51

58.7

1.05

1005

50–71

1.5–2.1

  Io17-chloro-G9*

200

59

4.3

4053

81–95

2.3–2.7

 MALASPINA, South Atlantic gyral province (SRR3965592, 3199 m)

  MP-SAtl-SRR3965592-G1

119

59.2

1.9

1944

64 - 85

2.3 – 3.02

  MP-SAtl-SRR3965592-G2

39

57.6

0.568

532

–

–

 MALASPINA, Indian south subtropical gyre province (SRR3963457, 4000 m)

  MP-SInd-SRR3963457-G1

54

59.3

2.04

1964

71 - 90

2.3 – 2.9

  MP-SInd-SRR3963457-G2

52

57.5

0.756

754

–

–

 MALASPINA, North Pacific tropical gyre province (SRR3961935, 4004 m)

  MP-NPac-SRR3961935-G1

54

59.1

2.09

1998

67–89

2.3–3.1

Single cell amplified genomes (SAGs)

 Pacific Ocean (ALOHA station, 770 m)

  SCGC-AAA240-N13

215

55

1.45

1565

43–62

2.3–3.4

 Atlantic Ocean (mid-Atlantic, 553 m)

  SCGC-AB-629-P13

64

41.4

0.84

862

59–71

1.2–1.4

  1. *An asterisk next to a genome indicates a bin containing more than one copy of the genome
  2. *Gray rows indicate small genomes ( < 50% average completeness)
Back to article page