Fig. 3: 16 rRNA gene phylogeny and abundance in metagenome and amplicon data. | The ISME Journal

Fig. 3: 16 rRNA gene phylogeny and abundance in metagenome and amplicon data.

From: Microbial communities of Auka hydrothermal sediments shed light on vent biogeography and the evolutionary history of thermophily

Fig. 3

Phylogeny of 284 16S rRNA genes reconstructed from the metagenomic data. From inside to outside the concentric circles around the phylogenetic tree indicate: the taxonomy of the major clades in the phylogeny, as assigned by Silva138, the recovery of the sequence through phyloFlash and/or annotation of the retrieved MAGs, the abundance in the surface (0–7 cm) and deep (7+ cm) section of the cores used for metagenomic sequencing, the abundance in the surface (0–7 cm) and deep (7+ cm) sections of the cores retrieved from Z-vent through amplicon sequencing, and the abundance in the shallow (0–7 cm) and deep (7+ cm) sections of the cores retrieved from Diane’s vent through amplicon sequencing. Circled numbers highlight abundant taxa discussed in the main text.

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