Fig. 5: PGx-dedicated bioinformatics algorithms concordance rate for selected nine core pharmacogenes in the current study. | The Pharmacogenomics Journal

Fig. 5: PGx-dedicated bioinformatics algorithms concordance rate for selected nine core pharmacogenes in the current study.

From: Development of an extensive workflow for comprehensive clinical pharmacogenomic profiling: lessons from a pilot study on 100 whole exome sequencing data

Fig. 5

The result for the total comparison of tools is illustrated as well. The concordance rate was calculated when there was at least one call for the variants. PharmaKU is not included here as it uses Stargazer as a built-in algorithm and the result was mainly the same when the correct input data was used (see the main text for more details). PharmCAT did not call any alleles for UGT1A1 and VKORC1. PGx pharmacogenomics.

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