Table 1 Significantly altered genes (top and bottom 20 genes) in MDD subjects compared to controls in the total fraction.

From: Molecular pathology associated with altered synaptic transcriptome in the dorsolateral prefrontal cortex of depressed subjects

Gene symbol

Ensemble ID

Locus

Fold change

p Value

q Value

Top 20 upregulated genes

TMEM189-UBE2V1

ENSG00000124208.16_3

Chr20:48,697,661–48,770,174

2.093301568

0.028970933

0.998154148

HNRNPUL2-BSCL2

ENSG00000234857.2_3

Chr11:62,457,747–62,494,856

1.862368887

0.029806405

0.998154148

SPI1

ENSG00000066336.11_2

Chr11:47,376,411–47,400,127

1.674116789

0.016973309

0.998154148

RASD1

ENSG00000108551.4_2

Chr17:17,397,751–17,399,709

1.671422929

0.008487038

0.998154148

HIST1H1D

ENSG00000124575.6_2

Chr6:26,234,496–26,235,161

1.6182264

0.021265941

0.998154148

HSPA2

ENSG00000126803.9_3

Chr14:65,002,623–65,012,891

1.587199534

0.03068192

0.998154148

OLFML3

ENSG00000116774.11_2

Chr1:114,522,013–114,578,194

1.566558294

0.015948973

0.998154148

H1FX

ENSG00000184897.5_2

Chr3:129,033,614–129,035,120

1.557723521

0.007713264

0.998154148

TMEM119

ENSG00000183160.8_4

Chr12:108,983,622–108,992,096

1.533970067

0.027726499

0.998154148

SYN2

ENSG00000157152.16_3

Chr3:12,045,876–12,232,900

1.529728606

0.025668161

0.998154148

SLC2A5

ENSG00000142583.17_3

Chr1:9,095,166–9,148,537

1.524777663

0.0259714

0.998154148

MGP

ENSG00000111341.9_2

Chr12:15,034,115–15,038,860

1.520322977

0.026291557

0.998154148

CD248

ENSG00000174807.3_2

Chr11:66,081,958–66,084,515

1.517306136

0.012513065

0.998154148

SYN1

ENSG00000008056.13_3

ChrX:47,431,297–47,479,342

1.514899142

0.010820886

0.998154148

ADAMTS2

ENSG00000087116.14_3

Chr5:178,537,852–178,772,431

1.504012857

0.023024431

0.998154148

SELENON

ENSG00000162430.16_3

Chr1:26,126,667–26,144,715

1.502459486

0.018145924

0.998154148

EHD1

ENSG00000110047.17_2

Chr11:64,619,114–64,655,768

1.499851368

0.00026562

0.998154148

ELK1

ENSG00000126767.17_2

ChrX:47,494,920–47,510,003

1.485837489

0.005823038

0.998154148

OLFML2B

ENSG00000162745.10_2

Chr1:161,952,982–161,993,644

1.484633409

0.038133823

0.998154148

IGFBP4

ENSG00000141753.6_2

Chr17:38,599,713–38,613,983

1.484402089

0.020842833

0.998154148

Bottom 20 downregulated genes

OTOGL

ENSG00000165899.10_2

Chr12:80,603,233–80,772,870

0.758383143

0.0073387

0.998154148

FP15737

ENSG00000215298.3

Chr8:23,430,157–23,432,974

0.751653359

0.029617859

0.998154148

ACAD11

ENSG00000240303.7_3

Chr3:132,276,982–132,379,567

0.750470175

0.048358226

0.998154148

RBBP4

ENSG00000162521.18_3

Chr1:33,116,743–33,151,812

0.749822389

0.020815195

0.998154148

HSPD1

ENSG00000144381.16_3

Chr2:198,351,305–198,381,461

0.745771365

0.023242035

0.998154148

TOGARAM1

ENSG00000198718.12_3

Chr14:45,431,411–45,543,634

0.743039018

0.009521289

0.998154148

GSTM5

ENSG00000134201.10_3

Chr1:110,254,877–110,318,050

0.740939805

0.035152072

0.998154148

FSBP

ENSG00000265817.2_3

Chr1:95,384,398–95,449,180

0.739829097

0.019761943

0.998154148

PPARA

ENSG00000186951.16_3

Chr22:46,546,424-46,639,653

0.736169585

0.044314345

0.998154148

QSER1

ENSG00000060749.14_2

Chr11:32,914,724–33,014,862

0.735464221

0.038886837

0.998154148

FABP6

ENSG00000170231.15_2

Chr5:159,614,374–159,665,742

0.731863888

0.028418238

0.998154148

ZNF709

ENSG00000242852.6_3

Chr19:12,571,998–12,624,668

0.71556927

0.007476814

0.998154148

RALB

ENSG00000144118.13_3

Chr2:120,997,640–121,052,289

0.714954298

0.025116048

0.998154148

DUSP6

ENSG00000139318.7_2

Chr12:89,741,009–89,747,048

0.713571153

0.024744029

0.998154148

MDM4

ENSG00000198625.12_2

Chr1:204,485,507–204,527,248

0.70941623

0.013522487

0.998154148

FCF1

ENSG00000119616.11_2

Chr14:75,179,847–75,205,323

0.702405537

0.008291242

0.998154148

NME1-NME2

ENSG00000011052.21_3

Chr17:49,230,951–49,249,105

0.651236153

0.049573833

0.998154148

MKLN1

ENSG00000128585.17_3

Chr7:130,794,855–131,181,395

0.630768248

0.014691013

0.998154148

AL662899.3

ENSG00000263020.6_4

Chr6:31,633,879–31,641,323

0.522821095

0.014578824

0.998154148

AD000671.1

ENSG00000188223.9_4

Chr19:36,236,579–36,245,420

0.491543271

0.015996805

0.998154148