Table 1 Significantly altered genes (top and bottom 20 genes) in MDD subjects compared to controls in the total fraction.
Gene symbol | Ensemble ID | Locus | Fold change | p Value | q Value |
---|---|---|---|---|---|
Top 20 upregulated genes | |||||
TMEM189-UBE2V1 | ENSG00000124208.16_3 | Chr20:48,697,661–48,770,174 | 2.093301568 | 0.028970933 | 0.998154148 |
HNRNPUL2-BSCL2 | ENSG00000234857.2_3 | Chr11:62,457,747–62,494,856 | 1.862368887 | 0.029806405 | 0.998154148 |
SPI1 | ENSG00000066336.11_2 | Chr11:47,376,411–47,400,127 | 1.674116789 | 0.016973309 | 0.998154148 |
RASD1 | ENSG00000108551.4_2 | Chr17:17,397,751–17,399,709 | 1.671422929 | 0.008487038 | 0.998154148 |
HIST1H1D | ENSG00000124575.6_2 | Chr6:26,234,496–26,235,161 | 1.6182264 | 0.021265941 | 0.998154148 |
HSPA2 | ENSG00000126803.9_3 | Chr14:65,002,623–65,012,891 | 1.587199534 | 0.03068192 | 0.998154148 |
OLFML3 | ENSG00000116774.11_2 | Chr1:114,522,013–114,578,194 | 1.566558294 | 0.015948973 | 0.998154148 |
H1FX | ENSG00000184897.5_2 | Chr3:129,033,614–129,035,120 | 1.557723521 | 0.007713264 | 0.998154148 |
TMEM119 | ENSG00000183160.8_4 | Chr12:108,983,622–108,992,096 | 1.533970067 | 0.027726499 | 0.998154148 |
SYN2 | ENSG00000157152.16_3 | Chr3:12,045,876–12,232,900 | 1.529728606 | 0.025668161 | 0.998154148 |
SLC2A5 | ENSG00000142583.17_3 | Chr1:9,095,166–9,148,537 | 1.524777663 | 0.0259714 | 0.998154148 |
MGP | ENSG00000111341.9_2 | Chr12:15,034,115–15,038,860 | 1.520322977 | 0.026291557 | 0.998154148 |
CD248 | ENSG00000174807.3_2 | Chr11:66,081,958–66,084,515 | 1.517306136 | 0.012513065 | 0.998154148 |
SYN1 | ENSG00000008056.13_3 | ChrX:47,431,297–47,479,342 | 1.514899142 | 0.010820886 | 0.998154148 |
ADAMTS2 | ENSG00000087116.14_3 | Chr5:178,537,852–178,772,431 | 1.504012857 | 0.023024431 | 0.998154148 |
SELENON | ENSG00000162430.16_3 | Chr1:26,126,667–26,144,715 | 1.502459486 | 0.018145924 | 0.998154148 |
EHD1 | ENSG00000110047.17_2 | Chr11:64,619,114–64,655,768 | 1.499851368 | 0.00026562 | 0.998154148 |
ELK1 | ENSG00000126767.17_2 | ChrX:47,494,920–47,510,003 | 1.485837489 | 0.005823038 | 0.998154148 |
OLFML2B | ENSG00000162745.10_2 | Chr1:161,952,982–161,993,644 | 1.484633409 | 0.038133823 | 0.998154148 |
IGFBP4 | ENSG00000141753.6_2 | Chr17:38,599,713–38,613,983 | 1.484402089 | 0.020842833 | 0.998154148 |
Bottom 20 downregulated genes | |||||
OTOGL | ENSG00000165899.10_2 | Chr12:80,603,233–80,772,870 | 0.758383143 | 0.0073387 | 0.998154148 |
FP15737 | ENSG00000215298.3 | Chr8:23,430,157–23,432,974 | 0.751653359 | 0.029617859 | 0.998154148 |
ACAD11 | ENSG00000240303.7_3 | Chr3:132,276,982–132,379,567 | 0.750470175 | 0.048358226 | 0.998154148 |
RBBP4 | ENSG00000162521.18_3 | Chr1:33,116,743–33,151,812 | 0.749822389 | 0.020815195 | 0.998154148 |
HSPD1 | ENSG00000144381.16_3 | Chr2:198,351,305–198,381,461 | 0.745771365 | 0.023242035 | 0.998154148 |
TOGARAM1 | ENSG00000198718.12_3 | Chr14:45,431,411–45,543,634 | 0.743039018 | 0.009521289 | 0.998154148 |
GSTM5 | ENSG00000134201.10_3 | Chr1:110,254,877–110,318,050 | 0.740939805 | 0.035152072 | 0.998154148 |
FSBP | ENSG00000265817.2_3 | Chr1:95,384,398–95,449,180 | 0.739829097 | 0.019761943 | 0.998154148 |
PPARA | ENSG00000186951.16_3 | Chr22:46,546,424-46,639,653 | 0.736169585 | 0.044314345 | 0.998154148 |
QSER1 | ENSG00000060749.14_2 | Chr11:32,914,724–33,014,862 | 0.735464221 | 0.038886837 | 0.998154148 |
FABP6 | ENSG00000170231.15_2 | Chr5:159,614,374–159,665,742 | 0.731863888 | 0.028418238 | 0.998154148 |
ZNF709 | ENSG00000242852.6_3 | Chr19:12,571,998–12,624,668 | 0.71556927 | 0.007476814 | 0.998154148 |
RALB | ENSG00000144118.13_3 | Chr2:120,997,640–121,052,289 | 0.714954298 | 0.025116048 | 0.998154148 |
DUSP6 | ENSG00000139318.7_2 | Chr12:89,741,009–89,747,048 | 0.713571153 | 0.024744029 | 0.998154148 |
MDM4 | ENSG00000198625.12_2 | Chr1:204,485,507–204,527,248 | 0.70941623 | 0.013522487 | 0.998154148 |
FCF1 | ENSG00000119616.11_2 | Chr14:75,179,847–75,205,323 | 0.702405537 | 0.008291242 | 0.998154148 |
NME1-NME2 | ENSG00000011052.21_3 | Chr17:49,230,951–49,249,105 | 0.651236153 | 0.049573833 | 0.998154148 |
MKLN1 | ENSG00000128585.17_3 | Chr7:130,794,855–131,181,395 | 0.630768248 | 0.014691013 | 0.998154148 |
AL662899.3 | ENSG00000263020.6_4 | Chr6:31,633,879–31,641,323 | 0.522821095 | 0.014578824 | 0.998154148 |
AD000671.1 | ENSG00000188223.9_4 | Chr19:36,236,579–36,245,420 | 0.491543271 | 0.015996805 | 0.998154148 |