Table 2 Three individuals with schizophrenia and TREs identified in the 3’UTR of genes DMPK and ATXN8OS.

From: Genome sequencing broadens the range of contributing variants with clinical implications in schizophrenia

Gene

OMIM ID Disease

Case ID /family members

Sex

AAO (y)

FHx of SCZ

FHx of OMIM disease

ID

Other features

Rare CNV

CTG repeat

Chromosomal position (GRCh37/hg19)

Size

Normal

Pathogenic

EH-estimated

Validated

DMPK

160900 DM1

Proband 72

M

19

No

 

No

Episodes of severe constipation

YesVUS

chr19:46273174 -46273699

5–35

≥51

97

>200

Father

M

NA

NA

Yes

No

Cataract

NA

NA

>200

Mother

F

NA

NA

 

No

No

NA

NA

~9

ATXN8OS

603680 SCA8

Proband 329

M

21

Yesa

 

No

No

No

chr13:70713162 -70713778

15-44

>110

116

>200

Father

M

NA

NA

 

No

No

NA

NA

~20

Mother

F

NA

NA

No

No

Unilateral “glaucoma”

NA

NA

>200

Proband 11

F

17

No

 

Yes

Cataracts

YesVUS

91

>200

Brother

M

NA

NA

 

NA

No

NA

NA

~20

Mother

F

NA

NA

No

Yes

No

YesVUS

NA

~100

  1. TREs identified in DMPK and ATXN8OS in three individuals with schizophrenia and their family members, together with their key clinical and genetic variables are shown
  2. F female, M male, AAO age at onset, y years, NA not applicable, FHx family history, SCZ schizophrenia/psychosis, ID borderline to mild intellectual disability, CNV copy number variant, OMIM online Mendelian inheritance in man EH ExpansionHunter; See Supplementary Table S4 for a list of tandem repeat loci examined in this study
  3. aProband 329 has a brother with schizophrenia; VUS, CNV of uncertain clinical significance, e.g., both proband 11 and her mother are identified to have a ~790 Kb deletion of uncertain significance overlapping ZNF804A; see Supplementary Table S3 for all VUS CNVs