Table 3 Studies examining alterations in the expression levels of neurotransmission-related genes.

From: Gene expression studies in Depression development and treatment: an overview of the underlying molecular mechanisms and biological processes to identify biomarkers

Citation

Sample

Methods

Gene

Main findings

Tissue

Kunii et al. 201571

176 schizophrenic patients 61 BPD patients 138 MDD patients 326 healthy controls

RT-qPCR

CHRFAM7A, CHRNA7

Increased expression levels of CHRNA7 mRNA in MDD patients compared with all other groups. Expression of CHRFAM7A was significantly elevated in all diagnostic groups compared with the control group.

Postmortem brain tissues

Gray et al. 201580

53 MMD patients: 26 males and 27 females 34 MDD suicide and 19 MDD non-suicide 32 healthy controls: 19 males and 13 females

RT-qPCR

GluR genes

The majority of the 21 GluR genes that were tested showed higher levels of expression in the MDD subjects relative to controls. The greatest effects were detected in the female groups.

Postmortem brain tissues

Chandley et al. 201386

19 MDD patients 20 healthy control

RT-qPCR immunostaining

SLC1A3, SLC1A2, GLUL, GFAP

Astrocytes, but not oligodendrocytes, demonstrated robust reductions in the expression of SLC1A3 and SLC1A2, whereas GLUL expression was unchanged in MDD patients when compared with controls. GFAP expression was lower in astrocytes, and we confirmed reduced GFAP protein in the LC using immunostaining methods.

Postmortem brain tissues

Chandley et al. 201481

18 MDD patients 18 healthy controls

RT-qPCR

GRIN1, GRIN2A, GRIN2B, GRIN2C, GRIN2D, GRIN3A, GRIN3B, GRIA1, GRIA2, GRIA4, GRIK1, GRIK3, GRIK5, GRM4, GRM5, GRM8

MDD subjects exhibited significantly higher expression levels of the NMDA receptor subunit genes, GRIN2B and GRIN2C and the metabotropic receptor genes, GRM4 and GRM5, in LC neurons.

Postmortem brain tissues

Oh et al. 201488

15 MDD patients: 7 with suicide, 8 without suicide 15 healthy controls

Reanalysis of existing postmortem data, found in the Stanley neuropathology consortium integrative database, a web-based tool that integrates datasets from the same postmortem brain samples.

GAD1, SLC1A1, SLC1A2, SLC1A3

The mean GAD1 mRNA was almost all slightly lower in the subjects with MDD as compared with the control group. While SLC1A1-3 mRNA expression was generally lower in the subjects with MDD as compared to the controls in each sub-region, it was only in the white matter (BA46) that SLC1A2 mRNA was significantly lower in the subjects with MDD as compared to the normal control group.

Postmortem brain tissues

  1. MDD major depressive disorder, PCR polymerase chain reaction, RT-qPCR reverse transcription (RT) quantitative PCR, BPD bipolar disorder.