Table 1 Rare variants identified in both alleles of either RELN or VLDLR genes and in one allele of genes for Ca2+ channels in individuals with ASD.
Patient ID | Gene | Region | Variant description | Relation | Inheritance |
---|---|---|---|---|---|
Brazilian cohort | |||||
F2688-1 | RELN | Exonic | RELN:NM_005045:exon48:c.C7538G:p.S2513C | Proband | Father |
RELN | Exonic | RELN:NM_005045:exon48:c.C7634T:p.A2545V | Mother | ||
CACNA1H | Splicing | CACNA1H:NM_021098:exon13:c.2907 + 1G>A | De novo | ||
F10832-1 | VLDLR | Exonic | VLDLR:NM_003383:exon8:c.T1132C:p.Y378H | Proband | Father |
VLDLR | Exonic | VLDLR:NM_003383:exon13:c.G1901A:p.R634H | Mother | ||
CACNA2D4 | Exonic | CACNA2D4:NM_172364:exon22:c.C2095T:p.L699F | Father | ||
F11463-1 | RELN | Exonic; Splicing | RELN:NM_005045:exon38:c.C5618T:p.T1873I | Proband | Father |
RELN | Exonic | RELN:NM_005045:exon42:c.G6343A:p.G2115S | Mother | ||
RYR3 | Exonic | RYR3:NM_001036:exon20:c.G2486A:p.R829H | Mother |
MSSNG cohort | |||||
---|---|---|---|---|---|
1-1098-003 | RELN | Exonic | RELN:NM_005045:exon39:c.G5961T:p.K1987N | Proband | Father/de novo |
RELN | Exonic | RELN:NM_005045:exon34:c.C5108G:p.P1703R | Mother | ||
RYR2 | Exonic | RYR2:NM_001035:exon67:c.G9569A:p.R3190Q | Mother | ||
2-1259-004 | RELN | Exonic | RELN:NM_005045:exon54:c.C8795A:p.S2932Y | Affected sibling | NA |
RELN | Exonic | RELN:NM_005045:exon25:c.C3477A:p.N1159K | NA | ||
RYR1 | Exonic | RYR1:NM_000540:exon29:c.C4213A:p.P1405T | NA | ||
5-5057-003 | RELN | Exonic | RELN:NM_005045:exon20:c.G2689A:p.D897N | Proband | Father |
RELN | Exonic | RELN:NM_005045:exon34:c.C5108G:p.P1703R | Mother | ||
ORAI1 | Exonic | ORAI1:NM_032790:exon2:c.126_127insA:p.A42fs | Mother | ||
7-0276-003 | VLDLR | Exonic | VLDLR:NM_003383:exon14:c.G1967A:p.R656H | Proband | Father/de novo |
VLDLR | Exonic | VLDLR:NM_003383:exon10:c.G1313A:p.G438D | Father/de novo | ||
VLDLR | Exonic | VLDLR:NM_003383:exon3:c.A242G:p.N81S | Mother | ||
CACNA1B | Exonic | CACNA1B:NM_000718:exon21:c.A3370G:p.I1124V | Mother | ||
AU2168301 | RELN | Exonic | RELN:NM_005045:exon2:c.T334C:p.F112L | Proband | Father |
RELN | Exonic | RELN:NM_005045:exon34:c.C5108G:p.P1703R | Mother | ||
GRIN2C | Exonic | GRIN2C:NM_000835:exon2:c.C193T:p.L65F | Mother | ||
AU3756301 | RELN | Exonic | RELN:NM_005045:exon39:c.G5923A:p.G1975S | Proband | Father/de novo |
RELN | Exonic | RELN:NM_005045:exon48:c.C7580A:p.S2527Y | Mother | ||
CACNA2D4 | Exonic | CACNA2D4:NM_172364:exon37:c.G3245A:p.C1082Y | Father/de novo | ||
CACNA1H | Exonic | CACNA1H:NM_021098:exon9:c.G1508A:p.R503H | Mother | ||
AU4027306 | RELN | Exonic | RELN:NM_005045:exon1:c.C59T:p.T20M | Affected sibling | Father |
RELN | Exonic | RELN:NM_005045:exon42:c.G6458A:p.G2153D | Mother | ||
CACNA1A | Exonic | CACNA1A:NM_001127222:exon46:c.C6772A:p.H2258N | De novo | ||
CACNB2 | Exonic | CACNB2:NM_201571:exon14:c.C1891T:p.R631C | Father |