Table 2 Functional analysis of significant protein modules.
From: Network analysis of plasma proteomes in affective disorders
Brown module | Turquoise module | |||||||
---|---|---|---|---|---|---|---|---|
Function | Number of proteins | P value | Q value | Function | Number of proteins | P value | Q value | |
BP | Proteolysis | 32 | 5.69E−15 | 1.31E−11 | Plasma lipoprotein particle remodeling | 8 | 1.14E−10 | 1.82E−07 |
Protein activation cascade | 14 | 2.47E−14 | 2.84E−11 | Protein–lipid complex remodeling | 8 | 1.14E−10 | 1.82E−07 | |
Complement activation | 13 | 1.63E−13 | 1.25E−10 | Macromolecular complex remodeling | 8 | 1.86E−10 | 1.99E−07 | |
Humoral immune response | 15 | 3.51E−11 | 2.01E−08 | Plasma lipoprotein particle organization | 8 | 2.80E−09 | 2.25E−06 | |
Response to external stimulus | 32 | 2.72E−10 | 1.23E−07 | Lipid transport | 16 | 3.94E−09 | 2.36E−06 | |
CC | Extracellular space | 54 | 4.35E−37 | 1.30E−34 | Extracellular region part | 68 | 6.18E−22 | 2.42E−19 |
Extracellular region part | 58 | 1.37E−27 | 2.03E−25 | High-density lipoprotein particle | 13 | 3.87E−20 | 7.58E-18 | |
Blood microparticle | 20 | 1.82E−24 | 1.81E−22 | Extracellular space | 49 | 1.18E−19 | 1.54E−17 | |
Extracellular region | 58 | 4.06E−23 | 3.02E−21 | Plasma lipoprotein particle | 13 | 1.67E−18 | 1.31E−16 | |
Extracellular vesicle | 40 | 3.72E−18 | 1.90E−16 | Lipoprotein particle | 13 | 1.67E−18 | 1.31E−16 | |
MF | Serine-type endopeptidase inhibitor activity | 10 | 2.25E−10 | 6.69E−08 | Cell adhesion molecule binding | 15 | 1.14E−06 | 4.73E−04 |
Endopeptidase inhibitor activity | 11 | 2.80E−09 | 3.78E−07 | Receptor binding | 26 | 5.02E−06 | 1.04E−03 | |
Peptidase inhibitor activity | 11 | 3.99E−09 | 3.78E−07 | Lipid binding | 17 | 1.06E−05 | 1.46E−03 | |
Endopeptidase regulator activity | 11 | 5.09E−09 | 3.78E−07 | Enzyme inhibitor activity | 12 | 1.54E−05 | 1.60E−03 | |
Peptidase regulator activity | 11 | 3.02E−08 | 1.62E−06 | Serine-type endopeptidase inhibitor activity | 7 | 2.06E−05 | 1.71E−03 | |
KEGG | Complement and coagulation cascades | 20 | 1.61E−26 | 2.18E−24 | Cholesterol metabolism | 9 | 7.00E−09 | 1.16E−06 |