Fig. 4: Gene regulatory network of BD basal ganglia by SCENIC analysis.

A−D Heatmaps showing the differential regulon activity of cell type-specific transcription factors between BD and control caudate, putamen, GP, and SN, respectively. Lower panels show violin plots of representative TF expression across different cell types between BD and control. E A summary table showing TFs shared by different basal ganglia nuclei with frequent targets of PDEs and ion channels.