Fig. 1: The schematics of computational pipeline. | Cell Death Discovery

Fig. 1: The schematics of computational pipeline.

From: The spatiotemporal dynamics of spatially variable genes in developing mouse brain revealed by a novel computational scheme

Fig. 1

SVGbit mainly consists of four modules, including aggregation index calculation, individual high-ranking SVG selection, SVG clustering and scoring for combinatorial SVGs. In the first and third rows, the color from blue to red represents spatial gene expressions from 0 to high value. The color from yellow to red represents the hotspot ratio from 0 to the high value in the SVG clusters.

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