Table 2 Stop-gained, frameshift, and start-lost variants of CMPK2 in gnomAD database.
From: Loss of function of CMPK2 causes mitochondria deficiency and brain calcification
Chromosome Positionsa | rsIDs | Transcript Consequenceb | Protein Consequence | Annotation | Total population | East Asian population | ||
---|---|---|---|---|---|---|---|---|
Allele Frequencyc | Homozygote Count | Allele Frequencyd | Homozygote Count | |||||
2:6851542 | rs776359222 | c.1126_1133del | p.Thr376SerfsTer2 | frameshift | 6.577E-06 | 0 | 0 | 0 |
2:6851587 | rs1188711213 | c.1088del | p.Pro363GlnfsTer15 | frameshift | 6.5699E-06 | 0 | 0.00019253 | 0 |
2:6851595 | rs1177412695 | c.1081 C > T | p.Gln361Ter | stop_gained | 6.5715E-06 | 0 | 0 | 0 |
2:6851628 | rs200083396 | c.1048 C > T | p.Gln350Ter | stop_gained | 6.5721E-06 | 0 | 0.00019275 | 0 |
2:6851632 | – | c.1043dup | p.Leu349SerfsTer22 | frameshift | 6.6141E-06 | 0 | 0 | 0 |
2:6851660 | – | c.1015del | p.Tyr339MetfsTer3 | frameshift | 6.5719E-06 | 0 | 0 | 0 |
2:6861364 | rs200690985 | c.812 C > A | p.Ser271Ter | stop_gained | 0.00024969 | 0 | 0 | 0 |
2:6861364 | rs200690985 | c.812 C > G | p.Ser271Ter | stop_gained | 6.5707E-06 | 0 | 0 | 0 |
2:6861368 | rs757743769 | c.808 C > T | p.Gln270Ter | stop_gained | 1.3146E-05 | 0 | 0 | 0 |
2:6863518 | – | c.736 C > T | p.Gln246Ter | stop_gained | 6.5701E-06 | 0 | 0 | 0 |
2:6863524 | rs773169808 | c.710_729del | p.Leu237ProfsTer22 | frameshift | 6.5739E-06 | 0 | 0 | 0 |
2:6865075 | rs1448087587 | c.621del | p.Leu207PhefsTer62 | frameshift | 6.5697E-06 | 0 | 0 | 0 |
2:6865141 | rs757223880 | c.556 C > T | p.Gln186Ter | stop_gained | 6.5685E-06 | 0 | 0 | 0 |
2:6865304 | rs894719630 | c.391_392del | p.Phe131ProfsTer8 | frameshift | 6.571E-06 | 0 | 0 | 0 |
2:6865317 | rs774163844 | c.379del | p.Ala127HisfsTer142 | frameshift | 6.5706E-06 | 0 | 0 | 0 |
2:6865354 | – | c.326_342del | p.Arg109ProfsTer25 | frameshift | 6.5738E-06 | 0 | 0.00019283 | 0 |
2:6865396 | – | c.301 C > T | p.Gln101Ter | stop_gained | 6.5822E-06 | 0 | 0 | 0 |
2:6865397 | rs1352574559 | c.299_300insG | p.His100GlnfsTer40 | frameshift | 4.607E-05 | 0 | 0 | 0 |
2:6865412 | – | c.257_284dup | p.His95GlnfsTer54 | frameshift | 6.5858E-06 | 0 | 0 | 0 |
2:6865439 | rs1485742827 | c.230_257del | p.Val77GlyfsTer183 | frameshift | 6.59E-06 | 0 | 0 | 0 |
2:6865476 | rs1178431768 | c.221 C > A | p.Ser74Ter | stop_gained | 6.5977E-06 | 0 | 0 | 0 |
2:6865582 | – | c.114del | p.Asp39ThrfsTer9 | frameshift | 6.5963E-06 | 0 | 0 | 0 |