Fig. 4: Mechanism by which PS regulates conformational changes. | Cell Discovery

Fig. 4: Mechanism by which PS regulates conformational changes.

From: The induced-fit and catalytic mechanisms of human G6PC1

Fig. 4

a Molecular formula of PS. b Structure and cryo-EM density of PS. c Hydrolytic activity measured by the rate of phosphate (Pi) release from WT G6PC1 and mutants solubilized in LMNG-CHS. Background activity of post-denaturation was subtracted. Results are averages of three independent measurements (n = 3), and error bars represent calculated standard error of the mean. d Overall structure of G6PC1Pi in complex with PS. The surface electrostatic potential is shown as a translucent overlay. G6PC1Pi is demonstrated as light pink cylinders. The structure of PS is depicted as spheres and colored by different atoms. e Conformational change of EL2 from G6PC1G6P to G6PC1Pi. The overall structure is represented as translucent grey surface, and PS is depicted as sticks. G6PC1G6P and G6PC1Pi are colored pale yellow and light pink, respectively. f Detailed interactions between PS and G6PC1Pi. The interacting residues are shown as sticks, and PS are demonstrated in a ball-and-stick representation. The carbon atoms of PS are colored purple. g–i Comparison of interactions between the serine headgroup of PS and nearby residues in G6PC1APO (g), G6PC1G6P (h) and G6PC1Pi (i). The hydrogen bonds are shown as teal dashed lines.

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