Abstract
Congenital neurological disorders are genetically highly heterogeneous. Rare forms of hereditary neurological disorders are still difficult to be adequately diagnosed. Pertinent studies, especially when reporting only single families, need independent confirmation. We present three unrelated families in which whole-exome sequencing identified the homozygous non-sense variants c.430[C>T];[C>T] p.(Arg144*), c.1219[C>T];[C>T] p.(Gln407*) and c.1408[C>T];[C>T] p.(Arg470*) in GTPBP2. Their clinical presentations include early onset and apparently non-progressive motor and cognitive impairment, and thereby overlap with findings in a recently described family harbouring a homozygous GTPBP2 splice site variant. Notable differences include structural brain abnormalities (e.g., agenesis of the corpus callosum, exclusive to our patients), and evidence for brain iron accumulation (exclusive to the previously described family). This report confirms pathogenicity of biallelic GTPBP2 inactivation and broadens the phenotypic spectrum. It also underlines that a potential involvement of brain iron accumulation needs clarification. Further patients will have to be identified and characterised in order to fully define the core features of GTPBP2-associated neurological disorder, but future approaches to molecular diagnosis of neurodevelopmental disorders should implement GTPBP2.
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References
Parikshak NN, Gandal MJ, Geschwind DH. Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders. Nat Rev Genet. 2015;16:441–58.
Liu YT, Lee YC, Soong BW. What we have learned from the next-generation sequencing: contributions to the genetic diagnoses and understanding of pathomechanisms of neurodegenerative diseases. J Neurogenet. 2015;29:103–12.
Matalonga L, Bravo M, Serra-Peinado C, et al. Mutations in TRAPPC11 are associated with a congenital disorder of glycosylation. Hum Mut. 2017;38:148–51.
Novarino G, Fenstermaker AG, Zaki MS, et al. Exome sequencing links corticospinal motor neuron disease to common neurodegenerative disorders. Science. 2014;343:506–11.
Jaberi E, Rohani M, Shahidi GA, et al. Identification of mutation in GTPBP2 in patients of a family with neurodegeneration accompanied by iron deposition in the brain. Neurobiol Aging. 2016;38:216 e211–216 e218.
Ishimura R, Nagy G, Dotu I, et al. RNA function. Ribosome stalling induced by mutation of a CNS-specific tRNA causes neurodegeneration. Science. 2014;345:455–9.
Trujillano D, Bertoli-Avella AM, Kumar Kandaswamy K, et al. Clinical exome sequencing: results from 2819 samples reflecting 1000 families. Eur J Hum Genet. 2017;25:176–82.
Wang K, Li M, Hakonarson H. ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res. 2010;38:e164.
Trujillano D, Oprea GE, Schmitz Y, Bertoli-Avella AM, Abou Jamra R, Rolfs A. A comprehensive global genotype-phenotype database for rare diseases. Mol Genet Genom Med. 2017;5:66–75.
Woods CG, Cox J, Springell K, et al. Quantification of homozygosity in consanguineous individuals with autosomal recessive disease. Am J Hum Genet. 2006;78:889–96.
Gregory A, Hayflick S. Neurodegeneration with brain iron accumulation disorders overview. In: Pagon RA, Adam MP, Ardinger HH et al. (eds). GeneReviews(R), Seattle (WA): 1993.
Schneider SA. Neurodegeneration with brain iron accumulation. Curr Neurol Neurosci Rep. 2016;16:9.
Darnell JC. Molecular biology. Ribosome rescue and neurodegeneration. Science. 2014;345:378–9.
Ishimura R, Nagy G, Dotu I, Chuang JH, Ackerman SL. Activation of GCN2 kinase by ribosome stalling links translation elongation with translation initiation. Elife. 2016;5: e14295.
Wallen RC, Antonellis A. To charge or not to charge: mechanistic insights into neuropathy-associated tRNA synthetase mutations. Curr Opin Genet Dev. 2013;23:302–9.
Acknowledgements
We thank the patients and their families for participating in the study. We acknowledge Christian Beetz and Harald Bruhn (both Jena University Hospital) and Prof. Cüneyt Calışır (Radiology Department, Eskisehir Osmangazi University) for support in the preparation of the manuscript.
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A.M.B.-A., Z.Y., A.M., M.C., O.P., P.B., and A.R. are employees of Centogene A.G.; J.G.A. and O.B. are former employees of the company.
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These authors contributed equally: Aida M. Bertoli-Avella, Jose M. Garcia-Aznar, and Oliver Brandau.
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Bertoli-Avella, A.M., Garcia-Aznar, J.M., Brandau, O. et al. Biallelic inactivating variants in the GTPBP2 gene cause a neurodevelopmental disorder with severe intellectual disability. Eur J Hum Genet 26, 592–598 (2018). https://doi.org/10.1038/s41431-018-0097-3
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DOI: https://doi.org/10.1038/s41431-018-0097-3
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