Table 2 Summary of established genes causing EE/DEE in our study cohort, as well as recurrent candidate genes for neurodevelopmental disorders

From: The role of recessive inheritance in early-onset epileptic encephalopathies: a combined whole-exome sequencing and copy number study

Disease gene category

Mode of inheritance

Autosomal

X-linked

Dominant

Recessive

Dominant

Recessive

(de novo)

(inherited or otherwise indicated)

(de novo)

(inherited)

Established genes/regions

1p36 deletion

ACO2 CH

CDKL5 deletion

ARX

 

22q11.2 duplication

AP4S1 HO

CDKL5

SMS

 

KCNQ2

BRAT1 CH

  
 

MBD5 deletion

POLG CH

  
 

SCN1A (3 × )

SPATA5 CH (one allele deletion)

  
 

SCN2A

SPATA5 CH (de novo and inherited)

  
 

SCN8A

SZT2 CH (de novo and inherited)

  
 

STXBP1 (2 × )

PRUNE1 HO

  
 

UBE3A deletion (2 × )

   
 

GABRB2

   

Recurrent candidate genes

PIK3AP1

GTF3C3 CH

  
  

UFC1 HO

  
  

WRAP53 CH

  
  1. CH compound heterozygous, HO homozygous