Table 1 Diversity indices including: populations name and region, number of samples (n), bioregion (based on IBRA version 7, 2012), corrected expected heterozygosity (Hecorr), observed heterozygosity (Ho), percentage of polymorphic loci (%PL), inbreeding coefficient (FIS), average FST between a single population and all others (AvFST), number of private alleles per population (#Ap), frequency of rare alleles (MAF < 0.05) per population (Ar), standardised multilocus heterozygosity (sMLH) and internal relatedness (IR)
Population | n | Bioregion | He (corr) ± SE | Ho ± SE | % PL | Fis ± SE | avFst ± SD | # Ap | Ar ± SE | sMLH ± SD | IR ± SD | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Magnetic Island (MI) | 20 | BBN | 0.14 ± 0.00 | 0.14 ± 0.00 | 47.8% | 0.01 ± 0.00 | 0.3 ± 0.12 | 0 | 0.07 ± 0.00 | 1.02 ± 0.05 | 0.57 ± 0.03 |
2 | St Bees Island (SB) | 21 | CMC | 0.14 ± 0.00 | 0.14 ± 0.00 | 53.8% | −0.03 ± 0.00 | 0.32 ± 0.13 | 0 | 0.08 ± 0.00 | 1.07 ± 0.36 | 0.55 ± 0.14 |
3 | St Lawrence (SL) | 18 | CMC | 0.18 ± 0.00 | 0.16 ± 0.00 | 60.7% | 0.07 ± 0.00 | 0.21 ± 0.11 | 0 | 0.11 ± 0.00 | 1.1 ± 0.16 | 0.55 ± 0.10 |
4 | Maryborough (M) | 14 | SEQ | 0.15 ± 0.00 | 0.14 ± 0.00 | 45.2% | 0 ± 0.00 | 0. 29 ± 0.12 | 0 | 0.06 ± 0.00 | 1.02 ± 0.09 | 0.57 ± 0.04 |
5 | Moreton Bay (MB) | 8 | SEQ | * | * | * | * | * | * | * | * | * |
6 | Koala Coast (KC) | 20 | SEQ | 0.17 ± 0.00 | 0.16 ± 0.00 | 59.6% | 0.03 ± 0.00 | 0.23 ± 0.11 | 0 | 0.1 ± 0.00 | 1.11 ± 0.09 | 0.55 ± 0.06 |
7 | Ipswich (I) | 22 | SEQ | 0.19 ± 0.00 | 0.17 ± 0.00 | 68.9% | 0.07 ± 0.00 | 0.21 ± 0.12 | 0 | 0.13 ± 0.00 | 1.2 ± 0.13 | 0.50 ± 0.07 |
8 | Lismore (LI) | 77 | SEQ | 0.17 ± 0.00 | 0.15 ± 0.00 | 74.5% | 0.11 ± 0.00 | 0.24 ± 0.11 | 5 | 0.15 ± 0.00 | 1.07 ± 0.11 | 0.55 ± 0.05 |
9 | Woolgoolga (W) | 9 | NNC | * | * | * | * | * | * | * | * | * |
10 | Gunnedah (GD) | 57 | BBS | 0.16 ± 0.00 | 0.15 ± 0.00 | 64.6% | 0.06 ± 0.00 | 0.26 ± 0.08 | 7 | 0.11 ± 0.00 | 1.03 ± 0.15 | 0.49 ± 0.10 |
11 | Port Macquarie (PM) | 85 | NNC | 0.18 ± 0.00 | 0.17 ± 0.00 | 80.9% | 0.06 ± 0.00 | 0.23 ± 0.1 | 5 | 0.18 ± 0.01 | 1.22 ± 0.19 | 0.58 ± 0.19 |
12 | Blue Mountains (BM) | 19 | SYB | 0.20 ± 0.00 | 0.18 ± 0.00 | 68.6% | 0.1 ± 0.00 | 0.15 ± 0.06 | 0 | 0.18 ± 0.01 | 0.99 ± 0.35 | 0.63 ± 0.11 |
13 | Campbelltown (CT) | 119 | SYB | 0.15 ± 0.00 | 0.14 ± 0.00 | 82.5% | 0.03 ± 0.00 | 0.32 ± 0.08 | 2 | 0.12 ± 0.00 | 1.1 ± 0.27 | 0.53 ± 0.11 |
14 | Southern Highlands (SH) | 25 | SYB | 0.18 ± 0.00 | 0.15 ± 0.00 | 64.0% | 0.08 ± 0.00 | 0.22 ± 0.07 | 0 | 0.09 ± 0.00 | 1.06 ± 0.15 | 0.56 ± 0.05 |
15 | South Gippsland (SG) | 17 | SCP | 0.11 ± 0.00 | 0.1 ± 0.00 | 37.7% | −0.01 ± 0.00 | 0.29 ± 0.12 | 0 | 0.04 ± 0.00 | 0.73 ± 0.06 | 0.70 ± 0.09 |
16 | Strzelecki (SZ) | 19 | SCP | 0.11 ± 0.00 | 0.11 ± 0.00 | 39.4% | −0.01 ± 0.00 | 0.27 ± 0.1 | 0 | 0.04 ± 0.00 | 0.76 ± 0.16 | 0.68 ± 0.09 |
17 | French Island (FI) | 39 | SCP | 0.10 ± 0.00 | 0.11 ± 0.00 | 49.1% | 0.09 ± 0.00 | 0.36 ± 0.08 | 0 | 0.09 ± 0.00 | 0.61 ± 0.24 | 0.80 ± 0.15 |
18 | Cape Otway (CO) | 28 | SCP | 0.12 ± 0.00 | 0.11 ± 0.00 | 53.7% | 0.08 ± 0.00 | 0.23 ± 0.1 | 0 | 0.07 ± 0.00 | 0.67 ± 0.34 | 0.75 ± 0.04 |
19 | Hamilton (H) | 4 | VIM | ** | ** | ** | ** | ** | ** | ** | ** | ** |
20 | Mt Lofty (ML) | 23 | EYB | 0.13 ± 0.00 | 0.12 ± 0.00 | 60.2% | 0.01 ± 0.01 | 0.42 ± 0.09 | 0 | 0.04 ± 0.00 | 0.59 ± 0.12 | 0.76 ± 0.12 |
21 | Kangaroo Island (KI) | 14 | KAN | 0.13 ± 0.00 | 0.09 ± 0.00 | 44.6% | 0.19 ± 0.01 | 0.3 ± 0.12 | 0 | 0.04 ± 0.00 | 0.59 ± 0.33 | 0.83 ± 0.11 |
