Table 1 Summary of Scots pine samples (N) included in the study, their sequencing depth, no. of SNPs and standard deviation (SD), and genetic diversity in the form of observed (HO), expected heterozygosity (HE) and average minor allele frequency (MAF).

From: Parentage and relatedness reconstruction in Pinus sylvestris using genotyping-by-sequencing

Samples

N

Median depth

Average no. SNPs

SD

HO

HE

MAF

Parents

28

14

5256

1248

0.357

0.338

0.365

Offspring

298

44

6375

1069

0.338

0.342

0.367

Nat. stands

99

44

6762

606

0.337

0.34

0.366

Add. orchard

300

16

5161

1299

0.312

0.332

0.359

Plus trees

149

19

5090

1517

0.225

0.328

0.345

  1. Västerhus orchard parents, offspring, natural stands, a crop from an additional seed orchard, and a group of Scots pine plus trees selected across Sweden were included in this analysis.
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