Table 1 SatDNA families recovered from six rounds of RepeatExplorer in male and female genomes of R. bergii and their general characteristics, length, A+T content, number of variants, abundance, divergence, and chromosomal occurrence.

From: High dynamism for neo-sex chromosomes: satellite DNAs reveal complex evolution in a grasshopper

SatDNA family	Length	A+T (%)	V	Abundance (%)		Divergence (%)		Presence of FISH signal
SatDNA family	Length	A+T (%)	V	M	F	M	F	neo-Y	neo-X	A
RbeSat01-53^a	53	58.50	7	0.3649	0.4308	9.89	9.86	Yes	Yes	Yes
RbeSat02-609	609	52.38	1	0.3044	0.3011	17.31	16.89		–
RbeSat03-391	391	56.27	1	0.2352	0.1633	19.64	23.04	Yes	No	No
RbeSat04-247	247	59.52	1	0.1760	0.1640	23.45	23.93		–
RbeSat05-297	297	60.27	1	0.1598	0.1921	4.81	4.65		–
RbeSat06-211	211	62.60	6	0.1424	0.1800	4.78	5.59		–
RbeSat07-277	277	63.90	1	0.1140	0.0752	2.32	2.41	No	Yes	Yes
RbeSat08-11^a	11	63.60	1	0.1015	0.0909	12.6	12.67	No	Yes	Yes
RbeSat09-215	215.8	59.70	4	0.0979	0.0776	2.88	3.1	Yes	Yes^b	Yes^b
RbeSat10-272	272.3	59.20	4	0.0918	0.0422	6.92	8.21	Yes	Yes^b	Yes^b
RbeSat11-98	98.2	52.30	6	0.0613	0.0680	8.8	8.78		–
RbeSat12-176^a	176.4	56.80	7	0.0607	0.0179	4.25	5.34	Yes	Yes	Yes
RbeSat13-214	214	63.10	2	0.0576	0.0710	6.38	6.1		–
RbeSat14-784	784	65.60	1	0.0565	0.0538	6.57	5.56		–
RbeSat15-288	288.7	56.40	3	0.0556	0.0297	6.7	7.19	Yes	Yes	Yes^b
RbeSat16-717	717	59.00	1	0.0553	0.0268	5.22	5.92	No	No	Yes
RbeSat17-175	175	52.60	1	0.0548	0.0524	23.72	24.49		–
RbeSat18-239	239	58.60	4	0.0359	0.0111	7.71	9.45	Yes	Yes^b	Yes
RbeSat19-162	162	56.20	1	0.0358	0.0325	19.1	18.02	Yes	Yes	Yes^b
RbeSat20-212	212	66.50	1	0.0351	0.0341	7.95	8.5		–
RbeSat21-209	209	57.90	3	0.0322	0.0002	7.98	24.54	Yes	No	No
RbeSat22-41	41	68.30	3	0.0306	0.0035	18.08	17.82	No	No	No
RbeSat23-285^a	285	55.80	2	0.0295	0.0002	2.44	18.06	Yes	No	No
RbeSat24-227	227	62.60	2	0.0292	0.0335	6.91	6.55		–
RbeSat25-166^a	166	59.00	5	0.0272	0.0011	6.87	19.11	Yes	No	No
RbeSat26-141	141	79.40	2	0.0197	0.0181	13.48	13.97		–
RbeSat27-196	196	71.40	1	0.0196	0.0082	3.86	3.33	No	No	Yes
RbeSat28-380	380	63.90	1	0.0187	0.0301	3.19	2.96		–
RbeSat29-21	21	52.40	1	0.0170	0.0041	18.44	6.85	No	No	Yes
RbeSat30-188	188	55.30	1	0.0168	0.0090	10.22	16.58	No	No	No
RbeSat31-123^a	123	63.40	4	0.0157	0.0216	10.89	10.04	No	Yes	Yes
RbeSat32-143	143	72.30	3	0.0148	0.0164	11.79	11.41		–
RbeSat33-95	95	67.40	1	0.0145	0.0109	8.42	8.17	No	No	No
RbeSat34-312	312	59.00	1	0.0139	0.0003	1.75	10.61	Yes	No	No
RbeSat35-374	374	60.40	1	0.0133	0.0023	3.43	11.83	Yes	Yes^b	No
RbeSat36-222	222	51.80	1	0.0131	0.0002	1.02	3.56	Yes	No	No
RbeSat37-22^a	22	54.50	1	0.0130	0.0235	9.79	8.94	No	No	Yes
RbeSat38-328	328	68.00	1	0.0128	0.0125	6.37	6.27		–
RbeSat39-232	232	59.90	2	0.0128	0.0312	5.95	6.12	No	No	No
RbeSat40-16^a	16	56.20	1	0.0126	0.0092	11.03	11.68	No	Yes	Yes
RbeSat41-90	90	55.60	1	0.0124	0.0060	9.76	13.91	No	No	No
RbeSat42-124	124	63.70	3	0.0116	0.0014	9.99	14.13	No	No	No
RbeSat43-415	415	61.70	1	0.0108	0.0117	15.17	14.88		–
RbeSat44-296	296	53.70	1	0.0101	0.0028	7.77	23.04	Yes	Yes^b	Yes^b
RbeSat45-5^a	5	60.00	1	0.0088	0.0108	11.6	10.81	No	Yes	Yes
RbeSat46-289	289	56.70	1	0.0081	0.0050	1.99	2.04	No	No	Yes
RbeSat47-231	231	64.90	1	0.0073	0.0047	3.16	4.44	No	No	No
RbeSat48-238	238	47.90	2	0.0063	0.0058	5.51	7.42		–
RbeSat49-221	221	53.40	1	0.0049	0.0182	10.19	5.29	No	No	No
RbeSat50-379	379	55.90	1	0.0047	0.0071	2.98	2.98		–
RbeSat51-37	37	51.40	1	0.0037	0.0041	10.96	10.68		–
RbeSat52-176	176	54.50	1	0.0035	0.0114	1.12	1.43	No	No	Yes
RbeSat53-21^a	21	42.90	2	0.0022	0.0025	4.11	3.89	No	Yes	Yes

V number of variants.
(–) satDNAs not selected for FISH analysis.
^aSatDNA families that were described by Palacios-Gimenez et al. (2018).
^bFacultative signals (present or absent) between individuals, see results.

Back to article page

Table 1 SatDNA families recovered from six rounds of RepeatExplorer in male and female genomes of R. bergii and their general characteristics, length, A+T content, number of variants, abundance, divergence, and chromosomal occurrence.

Search

Quick links