Fig. 5: Phylogenetic tree showing relationships among AGH sequences from terrestrial isopods. | Heredity

Fig. 5: Phylogenetic tree showing relationships among AGH sequences from terrestrial isopods.

From: Evolutionary transition to XY sex chromosomes associated with Y-linked duplication of a male hormone gene in a terrestrial isopod

Fig. 5

AGH2 and AGHY3 are missing from this phylogeny because those sequences were omitted because of their short length. The tree was generated using all AGH-like sequences from T. rathkei of at least 100 bp, along with reference AGH nucleotide sequences from other species, aligning them with MUSCLE v. 3.8.31 (Edgar 2004), selecting a model using ModelTest-NG v. 0.1.6 (Darriba et al. 2020), and running the analysis in RAxML-NG v. 0.9.0 (Stamatakis 2014) with 100 bootstrap replicates.

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