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CDK-4 regulates nucleolar size and metabolism at the cost of late-life fitness in C. elegans

Abstract

Studies on aging have centered on two molecular pathways: CDK4/6 and insulin/mTORC1. These pathways are thought to influence aging through distinct mechanisms: mTORC1 by reprogramming systemic metabolism, and CDK4 through p16-mediated senescence and inflammatory signaling (SASP). Here, we investigate the connection between aging and CDK4 in Caenorhabditis elegans, an organism lacking both p16 and SASP. Using a conditional degradation system, we demonstrate that CDK-4 inhibition in C. elegans phenocopies its aging-related functions observed in mammals. Worms with depleted CDK-4 exhibited accelerated aging phenotypes, including reduced lifespan, decreased motility, increased yolk accumulation, and earlier onset of senescence. At the physiological level, CDK4-inhibited worms show substantial metabolic shifts; including enhanced protein synthesis, elevated ATP production, and increased fat accumulation. These metabo-aging phenotypes occur independently of mTORC1, instead operating through the canonical CDK-4 effectors LIN-35 (Rb) and EFL-1 (E2F).

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Fig. 1: CDK-4 regulates nucleolar size with specific timing during development.
Fig. 2: LIN-35 and EFL-1 are required for the increase in nucleolar size downstream of CDK-4.
Fig. 3: CDK-4 regulates anabolic metabolism.
Fig. 4: The effect of CDK-4 on biosynthesis requires LIN-35.
Fig. 5: CDK-4 ablation leads to increased heat stress survival early in life.
Fig. 6: Loss of CDK-4 decreases longevity and accelerates rate of aging and degeneration.
Fig. 7: CDK-4 acts independently of mTORC1 to regulate nucleolar size.

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Acknowledgements

This work was supported by a Canadian Institutes of Health Research Project grant to WBD. (PJT 165837). WBD is the Canada Research Chair in Animal Models of Human Disease.

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Conceptualization: RW, WBD, RK. Methodology: RW, WBD, RK. Investigation: RW. Visualization: RW. Funding acquisition: WBD. Supervision: WBD, RK. Writing – original draft: RW. Writing – review & editing: RW, WBD, RK.

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Correspondence to Ran Kafri or W. Brent Derry.

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The authors declare no competing interests.

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No ethics approvals are required for research using Caenorhabditis elegans in Canada. All experiments were performed in accordance with the relevant guidelines and regulations.

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Webster, R., Quintana, M., Yu, B. et al. CDK-4 regulates nucleolar size and metabolism at the cost of late-life fitness in C. elegans. Heredity (2025). https://doi.org/10.1038/s41437-025-00769-7

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  • DOI: https://doi.org/10.1038/s41437-025-00769-7

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