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Beyond inversions and deletions: the evolutionary and functional insights from translocations, fissions, and fusions in animal genomes

Abstract

Structural variants, such as deletions, insertions, and inversions, have been increasingly recognized as important drivers of genome evolution, in the era of high-throughput sequencing. However, large-scale chromosomal rearrangements involving multiple chromosomes, including translocations, chromosomal fusions, and fissions, remain relatively understudied, especially outside of clinical and model systems, due to challenges in their detection and analysis. While the earlier understanding of translocations came from human cancer genomics, how such mutations have shaped genome evolution across animal lineages remains insufficiently understood. Recent advances in long-read sequencing, chromosome-level assemblies, and 3D genome conformation techniques are now revealing the prevalence and evolutionary significance of these large genomic structural rearrangements. Translocations can relocate genes into new regulatory environments, chromosome fusions can suppress recombination, and chromosome fissions can restructure chromosomal architecture, modifying the spatial and regulatory context of genes, thereby shaping evolutionary potential. Transposable elements further complicate this landscape by both promoting chromosomal instability and serving as substrates for rearrangement. Together, these changes can drive adaptive evolution, shape karyotype evolution, and contribute to sex chromosome turnover.

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Fig. 1: Chromosomal translocations.
Fig. 2: Chromosome fusion and fission in monocentric chromosomes.
Fig. 3: Examples of the evolutionary consequences of chromosomal rearrangements.

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Acknowledgements

We thank Drs. Simen Sandve, Nicola Barson, and the anonymous reviewers for their valuable comments on an earlier version of this manuscript. This work was supported by the Research Council of Norway through the FRIPRO Young Talent grant (NFR 325874).

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Célian Diblasi developed the concept of the article and was responsible for writing the initial draft. Marie Saitou supervised the project and revised the manuscript for clarity and scientific accuracy. Both authors contributed to the final version and approved it for submission.

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Correspondence to Célian Diblasi or Marie Saitou.

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Diblasi, C., Saitou, M. Beyond inversions and deletions: the evolutionary and functional insights from translocations, fissions, and fusions in animal genomes. Heredity (2025). https://doi.org/10.1038/s41437-025-00785-7

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  • DOI: https://doi.org/10.1038/s41437-025-00785-7

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