Table 2 Differentially expressed genes (DEGs) encoding wall-associated kinases (WAKs) during infection by Pythium ultimum

From: Genotype-specific suppression of multiple defense pathways in apple root during infection by Pythium ultimum

 

log2FC per genotype and timepoint

Genes

B.9-24

B.9-48

B.9-72

G.935-24

G.935-48

G.935-72

MDP0000230524

2.0

  

1.2

1.7

 

MDP0000186304

1.3

 

1.7

 

1.7

 

MDP0000183195

 

1.9

    

MDP0000281090

 

1.8

1.2

   

MDP0000426154

 

2.2

1.4

   

MDP0000251865

 

1.8

    

MDP0000656197

 

1.5

    

MDP0000170906

 

1.7

1.3

   

MDP0000567084

 

2.0

1.2

1.4

2.3

 

MDP0000317025

 

3.9

    

MDP0000153539

 

3.3

1.7

 

1.6

 

MDP0000206106

  

1.3

   

MDP0000267001

  

3.4

1.6

2.8

 

MDP0000562934

   

−1.2

  

MDP0000681106

   

1.0

  

MDP0000240979

   

1.0

  

MDP0000247933

   

1.0

  

MDP0000236093

    

2.1

 
  1. The values of log2FC ≥ 1 and p-adj values ≤ 0.05. were used as selecting criteria of DEGs using the method described in MM. The symbol “−” in front of the number indicates the downregulation in infected root as compared with mock-inoculation control
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