Table 2 Differentially expressed transcripts (DETs) of the hormone and flowering genes identified from the comparison of leaf tissues of Mu-legacy and ‘Legacy’ plants

From: VcRR2 regulates chilling-mediated flowering through expression of hormone genes in a transgenic blueberry mutant

Query id

Subject id

Blast_e-value

Pathway

Gene name

Annotation by trinotate

Log2(Mu-legacy/Legacy) 2018 data

Log2(Mu-legacy/Legacy–VcDDF1-OX) 2014 data

Log2(Mu-legacy-T1/Legacy) 2014 data

Log2(Legacy–VcDDF1-OX/Legacy) 2014 data

Log2(Mu-legacy/Legacy) 2014 data

 

c49456_g2_i2

  

VcARP6

ACTS_RAT

#N/A

−6.17

−4.73

#N/A

−5.98

 

c66039_g1_i1

  

nptII

KKA2_KLEPN

10.29

#N/A

9.79

10.60

9.33

 

c92529_g4_i2

  

VcRR2

ARR2_ARATH

8.08

5.77

6.15

#N/A

6.06

 

c32575_g1_i1

  

VcDDF1

DRE1E_ARATH

10.28

−3.49

#N/A

7.64

5.31

 

c96767_g2_i12

  

VcRR2

–

4.70

4.00

5.07

#N/A

#N/A

AT2G27690.1

c79501_g3_i1

4.00E−29

JA

CYP94C1

C96AF_ARATH

1.42

−2.34

3.16

#N/A

#N/A

AT1G75450.1

c83077_g1_i1

0

Cytokinin

ATCKX6, ATCKX5, CKX5

CKX5_ARATH

−1.62

2.00

#N/A

#N/A

#N/A

AT2G23620.1

c83935_g1_i1

6.00E−46

SA

MES1, ATMES1

MES17_ARATH

−0.97

1.18

−1.61

−0.82

#N/A

AT2G23620.1

c83935_g1_i2

2.00E−45

SA

MES1, ATMES1

MES17_ARATH

−0.79

1.26

−1.44

−0.90

#N/A

AT2G23620.1

c83935_g1_i3

8.00E−46

SA

MES1, ATMES1

MES17_ARATH

−0.75

1.27

−1.68

−0.82

#N/A

AT2G43820.1

c85921_g3_i2

2.00E−84

SA

GT, ATSAGT1, SGT1, UGT74F2, SAGT1

UGT1_GARJA

−0.68

1.34

#N/A

#N/A

#N/A

AT3G11480.1

c97521_g2_i1

2.00E−100

SA

BSMT1, ATBSMT1

–

−1.38

−3.54

#N/A

1.31

#N/A

AT4G25420.1

c89942_g2_i1

5.00E−55

GA

ATGA20OX1, AT2301, GA5, GA20OX1

SRG1_ARATH

−0.86

−1.37

#N/A

#N/A

#N/A

AT4G02780.1

c96791_g4_i1

0

GA

ATCPS1, CPS, CPS1, GA1, ABC33

KSA_PEA

1.60

2.89

2.31

#N/A

#N/A

AT1G13260.1

c83982_g1_i1

8.00E−132

Flower

RAV1, EDF4

RAV1_ARATH

1.35

3.07

−4.66

#N/A

#N/A

AT5G60910.1

c88116_g1_i1

5.00E−91

Flower

AGL8, FUL

AGL8_SOLTU

−2.38

4.23

#N/A

#N/A

#N/A

AT4G02050.1

c85501_g3_i2

8.00E−57

Sucrose

STP7

–

1.57

−1.62

1.52

#N/A

#N/A

AT4G21480.1

c85501_g3_i2

6.00E−54

Sucrose

STP12

–

1.57

−1.62

1.52

#N/A

#N/A

AT1G10370.1

c73618_g2_i1

1.00E−30

Sucrose

ATGSTU17, ERD9, GST30B, GST30, GSTU17

–

3.04

−1.97

3.23

1.66

#N/A

AT3G57040.1

c83921_g3_i2

3.00E−76

 

ARR9, ATRR4

ARR9_ARATH

−0.62

#N/A

#N/A

#N/A

#N/A

AT1G10470.1

c86949_g1_i2

5.00E−41

 

ARR4, MEE7, ATRR1, IBC7

ARR9_ARATH

−0.64

#N/A

#N/A

#N/A

#N/A

  1. Corresponding DETs identified from the comparisons of leaf tissues between Mu-legacy and Legacy–VcDDF1-OX, Mu-legacy-T1 and ‘Legacy’, Legacy–VcDDF1-OX and ‘Legacy’, and Mu-legacy and ‘Legacy’ from a 2014 study were also included for the cross-comparison of the 2018 and 2014 data. #N/A: No differential expression
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