Table 1 Summary of the final assembly of the sponge gourd genome
Illumina + 10× Genomics+ PacBio+ Hi-C | ||||
|---|---|---|---|---|
Sample ID | Length | Number | ||
Contig(bp) | Scaffold(bp) | Contig | Scaffold | |
Total | 655,835,779 | 656,189,986 | 480 | 332 |
Max | 22,699,861 | 55,641,800 | – | – |
Number≥2 kb | – | – | 462 | 315 |
N50 | 8,800,239 | 48,760,765 | 25 | 7 |
N60 | 6,922,768 | 48,278,130 | 33 | 8 |
N70 | 4,570,118 | 47,313,622 | 45 | 10 |
N80 | 3,331,685 | 46,820,663 | 61 | 11 |
N90 | 1,493,572 | 46,425,688 | 91 | 12 |
