Table 1 Comprehensive nomenclature and genomic and biochemical information for 67 sugar transporter (ST) genes identified in strawberry (F. vesca) (genome v4.0 integrated with protein annotation v4.0.a2)

From: The sugar transporter system of strawberry: genome-wide identification and expression correlation with fruit soluble sugar-related traits in a Fragaria × ananassa germplasm collection

Name	Gene ID (v4.0)	Gene ID (v2.0.a2)	Chromosome location	DNA-bp	mRNA-bp	AA^a	TMH^b	LOC^c	MW^d	PIe
SUT (sucrose transporter)
FvSUT1	FvH4_2g12320	gene27493	Fvb2:10809208–10812348	3141	2284	504	12	P10-V3-E1	53.4	8.29
FvSUT2	FvH4_2g40120	gene15110	Fvb2:28660864–28663047	2184	1973	496	12	P7-V5-E2	52.6	9.35
FvSUT3	FvH4_2g22550	gene08189	Fvb2:18495248–18496927	1680	1497	498	12	P6-V6-E2	52.7	9.28
FvSUT4	FvH4_2g40110	gene15111	Fvb2:28658453–28660330	1878	1497	498	12	P6-V6-E2	52.7	9.33
FvSUT5	FvH4_5g04290	gene32070	Fvb5:2552336–2553811	1476	1476	491	12	P10-V3-Cy1	52.6	8.72
FvSUT6	FvH4_5g33660	gene26850	Fvb5:24368479–24376566	8088	2637	505	10	P13-V1	54.7	8.98
FvSUT7	FvH4_4g31620	gene03989	Fvb4:30685393–30691542	6150	3171	604	12	P6-E5-Ch1	64.7	6.53
FvSUT8	FvH4_5g04340	gene32073	Fvb5:2565141–2566844	1704	1704	491	12	P9-V3-Cy1	52.5	8.59
STP (sugar transporter protein/monosaccharide transporter)
FvSTP1	FvH4_7g27120	gene21181	Fvb7:20326417–20328628	2212	1866	507	10	V8-P4-Cy1	55.0	9.06
FvSTP2	FvH4_7g27100	gene21179	Fvb7:20319932–20322128	2197	1856	507	10	P8-V3-G2	55.2	9.19
FvSTP3	FvH4_5g33980	gene26442	Fvb5:24648039–24650128	2090	1805	506	12	P8-V4-Cy1	55.2	9.17
FvSTP4	FvH4_3g03900	gene30715	Fvb3:2172524–2175538	3015	2106	519	11	P8-V3-Cy1	57.6	9.09
FvSTP5	FvH4_3g36050	gene14091	Fvb3:30931248–30933020	1773	1773	519	12	P13-E1	57.5	8.93
FvSTP6	FvH4_2g06250	gene28592	Fvb2:5184017–5185860	1844	1548	515	11	V8-P4-M1	56.1	8.86
FvSTP7	FvH4_2g06240	gene35657	Fvb2:5177597–5180040	2444	2444	386	8	P10-Ch2-Ex1	42.4	8.89
FvSTP8	FvH4_4g15150	gene05814	Fvb4:18718148–18723219	5072	2147	529	12	P5-V4-E2	57.8	8.92
FvSTP9	FvH4_2g06241	gene28591	Fvb2:5181428–5183150	1723	1548	515	12	V10-G2-Cy1	56.1	8.86
FvSTP10	FvH4_1g01560	gene35260	Fvb1:832380–835157	2778	2355	514	11	P13-V1	56.1	9.21
FvSTP11	FvH4_3g36070	gene14093	Fvb3:30937830–30939694	1865	1865	519	12	P13-E1	57.5	8.93
FvSTP12	FvH4_4g15180	gene05838	Fvb4:18782318–18786165	3848	1838	507	12	V6-P5-E2	55.3	9.39
FvSTP13	FvH4_4g15220	gene05833	Fvb4:18796858–18799448	2591	1703	507	12	V7-P5-Cy1	55.2	9.32
FvSTP14	FvH4_4g15172	gene05840	Fvb4:18764250–18776097	11848	1861	507	12	P6-V4-E2	55.7	9.25
FvSTP15	FvH4_4g15221	gene05832	Fvb4:18799848–18803346	3499	2060	515	12	P10-V2-G2	56.6	9.38
FvSTP16	FvH4_5g01480	gene32382	Fvb5:913079–915584	2506	2010	518	12	P9-V2-E2	56.7	9.17
FvSTP18	FvH4_4g15160	gene05813	Fvb4:18730034–18732543	2510	2051	509	11	V6-E3-P2	55.6	9.2
FvSTP19	FvH4_2g38270	gene08543	Fvb2:27722776–27725214	2439	1894	512	12	V10-P3-Cy1	56.1	9.29
FvSTP20	FvH4_4g15170	gene05844	Fvb4:18754414–18756830	2417	1979	512	12	P5-V5-E2	56.1	9.07
FvSTP21	FvH4_5g37390	gene30013	Fvb5:27487448–27490353	2906	2404	515	12	P9-V2-E2	56.2	9.44
FvSTP22	FvH4_1g05770	gene11877	Fvb1:3043103–3046113	3011	2209	515	12	P9-V3-Cy1	56.6	9.1
FvSTP23	FvH4_5g37380	gene30014	Fvb5:27482815–27486346	3532	1998	462	11	P7-Ch6-M1	51.0	9.43
FvSTP24	FvH4_6g00780	gene16779	Fvb6:459176–461815	2640	2242	521	12	P12-V1-E1	57.3	7.89
SFP (sugar facilitator protein)
FvSFP1	FvH4_6g05090	gene22338	Fvb6:2827786–2831540	3755	1707	488	12	V9-P4-G1	52.3	5.07
FvSFP2	FvH4_6g05060	gene22342	Fvb6:2809306–2812407	3102	1449	482	12	P5-V5-E2	51.9	5.69
FvSFP3	FvH4_6g05111	gene41935	Fvb6:2857091–2864319	7229	1503	475	12	P6-V4-G3	50.8	5.45
FvSFP4	FvH4_6g05120	gene22330	Fvb6:2865573–2868691	3119	1484	463	12	V9-P4-E1	49.6	5.29
FvSFP5	FvH4_6g05051	gene22344	Fvb6:2797433–2801865	4433	1862	482	12	P8-V5-E1	51.7	5.74
FvSFP6	FvH4_6g05130	gene37522	Fvb6:2870088–2873655	3568	1808	492	12	P6-V5-G3	52.2	7.5
FvSFP7	FvH4_6g05021	gene37520	Fvb6:2781539–2792890	11352	1516	482	9	P11-N2-V1	52.2	4.78
FvSFP8	FvH4_2g24280	gene27745	Fvb2:19840545–19845044	4500	2489	464	12	P11-V2-E1	49.8	6.45
FvSFP9	FvH4_4g16900	gene06691	Fvb4:20836435–20840314	3880	2100	490	11	P7-V3-G3	53.3	8.3
FvSFP10	FvH4_6g05050	gene37521	Fvb6:2792612–2796583	3972	1943	464	12	V11-P2-G1	50.3	5.36
FvSFP11	FvH4_2g24290	gene27747	Fvb2:19850438–19853719	3282	1443	480	12	P13-V1	51.8	5.55
FvSFP12	FvH4_2g24260	gene27742	Fvb2:19819035–19823390	4356	2040	468	12	P11-V1-E1	50.6	8.49
FvSFP13	FvH4_6g05091	gene22337	Fvb6:2831842–2836625	4784	2001	666	15	P8-V4-E1	72.3	7.49
FvSFP14	FvH4_6g05092	gene22336	Fvb6:2838149–2841691	3543	1428	475	10	P8-V4-E1	51.5	7.97
FvSFP15	FvH4_2g39720	gene15153	Fvb2:28445198–28450458	5261	1965	486	12	P7-V3-G3	52.6	7.63
PMT (Polyol/monosaccharide Transporter)
FvPMT1	FvH4_2g08400	gene20355	Fvb2:7322676–7325621	2946	1608	535	10	P8-V2-E2	57.9	8.96
FvPMT2	FvH4_2g08430	gene20372	Fvb2:7341155–7343693	2539	1796	530	10	P9-V2-G2	57.8	9.26
FvPMT3	FvH4_1g13630	gene29572	Fvb1:7508647–7510873	2227	1913	510	12	P7-V3-G3	55.6	9.12
FvPMT4	FvH4_1g04750	gene35289	Fvb1:2509124–2512533	3410	2557	543	12	P4-V3-E2	59.1	9.18
FvPMT5	FvH4_5g27230	gene37300	Fvb5:18513378–18516095	2718	2436	526	10	V6-P5-G3	56.6	5.35
FvPMT6	FvH4_3g04750	gene30425	Fvb3:2712517–2715598	3082	2182	529	10	P6-V3-G3	57.0	5.75
FvPMT7	FvH4_1g04760	gene30886	Fvb1:2514290–2516951	2662	2104	524	10	P7-V6-E1	57.0	9.44
INT (inositol transporter)
FvINT1	FvH4_4g11240	gene22419	Fvb4:15033109–15040517	7409	1893	477	12	V8-P4-Cy1	51.3	5.25
FvINT2	FvH4_3g00750	gene19794	Fvb3:371453–375337	3885	2555	588	10	P13-E1	63.9	8.73
FvINT3	FvH4_3g00760	gene19793	Fvb3:375957–378870	2914	2170	581	12	P13-V1	63.0	8.68
TST (tonoplast sugar transporter)
FvTST1	FvH4_5g25950	gene31477	Fvb5:17418142–17423728	5587	3286	738	10	P10-V3-M1	78.9	4.93
FvTST2	FvH4_1g10110	gene35340	Fvb1:5495978–5499471	3494	2944	760	11	P10-V3-G1	81.5	5.35
FvTST3	FvH4_1g10120	gene35341	Fvb1:5499840–5503255	3416	2529	714	10	P12-V1-G1	76.7	5.5
FvTST4	FvH4_2g16850	gene17337	Fvb2:14645992–14651997	6006	4356	740	11	P10-V3-G1	78.7	5.33
pGlcT (plastidic glucose transporter)
FvpGlcT1	FvH4_1g25970	gene12375	Fvb1:17880202–17886313	6112	2192	541	11	P11-Ch1-V1	57.1	9.41
FvpGlcT2	FvH4_1g04310	gene30931	Fvb1:2304681–2310134	5454	2336	500	10	P7-E6-M1	53.7	7.6
FvpGlcT3	FvH4_6g31830	gene37760	Fvb6:24921813–24927288	5476	1305	434	9	V9-P4-Ex1	46.1	8.7
FvpGlcT4	FvH4_6g42430	gene37879	Fvb6:33080926–33084593	3668	2108	546	11	P8-Ch3-E2	59.7	7.95
VGT (vacuolar glucose transporter)
FvVGT1	FvH4_7g33891	gene38731	Fvb7:24015104–24019010	3907	1494	497	12	V6-P5-G3	53.2	5.16
FvVGT2	FvH4_7g33900	gene38732	Fvb7:24019580–24023243	3664	1497	498	11	P7-V3-E2	52.8	7.54
FvVGT3	FvH4_3g36930	gene30209	Fvb3:31609336–31613511	4176	2264	432	10	P9-V5	46.1	9.05

^aNumber of amino acid residues of deduced ST proteins
^bNumber of transmembrane helices, as predicted by the TMHMM Server v2
^cSubcellular localization, probability values predicted by PSORT (the first three locations shown). abbreviations for sites: P plasma membrane, V vacuolar membrane, Ch chloroplast, M mitochondrion, N nucleus, Er endoplasmatic reticulum, Ex extracellular space, C ycytosolic, G Golgi body
^dMolecular weight of the amino acid sequence, kDa is kilo Daltons
^eIsoelectric point

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Table 1 Comprehensive nomenclature and genomic and biochemical information for 67 sugar transporter (ST) genes identified in strawberry (F. vesca) (genome v4.0 integrated with protein annotation v4.0.a2)

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