Table 1 Statistics and characteristics of the genome of C. serrulata
Characteristics | Number | Size | Sequence coverage (X) | Percentage |
|---|---|---|---|---|
Illumina reads | 38.14 Gb | 148.62 | ||
Nanopore reads | 47.99 Gb | 180.84 | ||
Hi-C reads | 36.77 Gb | 143.28 | ||
The estimate of genome size | 256.65 Mb | |||
Final-assembly genome size | 265.40 Mb | |||
Contig number and N50 | 304 | 1.56 Mb | ||
Maximum contig | 7.34 Mb | |||
Scaffold number and N50 | 67 | 31.12 Mb | ||
Maximum scaffold | 49.87 Mb | |||
GC content | 38.51% | |||
Heterozygosity percentage | 1.67% | |||
Total repetitive sequences | 130.11 Mb | 49.02% | ||
Total protein-coding genes | 29,094 | 104.75 Mb | ||
Annotated protein-coding genes | 27,611 | 94.90% | ||
MicroRNA | 94 | |||
Ribosomal RNA (rRNA) | 315 | |||
Transfer RNA (tRNA) | 472 |
