Fig. 3: KEGG enrichments of upregulated genes in nectarine.

a Metabolic pathways from the KEGG database that were found in at least half of the eight comparisons obtained in the differential expression analyses (inoculated vs control). The dot size represents the log of the inverted P-adj value obtained in the KEGG enrichment analyses along with all the time points in both stages (P-adj value ≤0.05) (Supplementary Table S3). b The magnitude of the fruit response in terms of the number of DEGs that have KEGG annotations for the selected metabolic pathways in both stages through time. Each color represents one different KEGG pathway