Table 2 Comparisons between the genomes of five tree species in Salicaceae
From: Genome sequencing and phylogenetic analysis of allotetraploid Salix matsudana Koidz
S. purpurea (diploid) | S. suchowensis (diploid) | S. matsudana (tetraploid) | P. euphratica (diploid) | P. trichocarpa (diploid) | |
---|---|---|---|---|---|
Genome size | 392 Mb | 425 Mb | 656 Mb | 497 Mb | 485 Mb |
Assembled genome sequence size | 348 Mb | 303 Mb | 531 Mb | 323 Mb | 388 Mb |
Scaffold N50 | 190.9 Kb | 925.0 Kb | 12,349.8 Kb | 482.1 Kb | 19,500 Kb |
Contig N50 | 45.6 Kb | 17.4 Kb | 945.8 Kb | 40.4 Kb | 552.8 Kb |
Number of predicted genes | 37,865 | 26,599 | 57,841 | 34,279 | 42,950 |
Gene density (genes per Mb) | 109 | 88 | 109 | 106 | 111 |