Table 1 MADS-box genes in Averrhoa carambola, Arabidopsis thaliana, Cephalotus follicularis and Theobroma cacao.

From: The genome sequence of star fruit (Averrhoa carambola)

Category

A. carambola

A. thaliana21

C. follicularis14

T. cacao22,23

 

Functional

Pseudo

Functional

Pseudo

Functional

Pseudo

Functional

Pseudo

Type II (Total)

48a

 

45

 

27

 

68

 

MIKCc

43

 

39

 

24

 

58

 

A

3

 

4

 

3

 

7

 

AGL12

1

 

1

 

1

 

1

 

C/D

3

 

4

 

3

 

10

 

SOC1

3

 

6

 

3

 

7

 

SVP

15

 

2

 

2

 

4

 

ANR1

5

 

4

 

2

 

3

 

Bs

1

 

2

 

1

 

4

 

B-PI

1

 

1

 

1

 

1

 

B-AP3

2

 

1

 

2

 

5

 

AGL6

2

 

2

 

1

 

5

 

E

4

 

4

 

3

 

6

 

FLC

1

 

6

 

0

 

3

 

AGL15

2

 

2

 

2

 

2

 

MIKCa

5

 

6

 

3

 

10

2

Type I (Total)

28

2

61

 

24

 

28

 

Mα

20

 

25

 

15

 

8

3

Mβ

2

2

20

 

5

2

2

1

MÎł

4

 

16

 

4

 

13

1

Total

74

2

106

 

51

2

91

7

  1. aThe number of MADS-box genes identified in this study. Genes with a stop codon in the MADS-box domain were categorized as pseudogenes.
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