Fig. 4: Analysis of protein families in V. riparia and V. vinifera.
From: Draft genome of the Native American cold hardy grapevine Vitis riparia Michx. ‘Manitoba 37’
Heatmap displaying the differences in numbers of genes per a protein family or b Gene ontology (GO) term. c Protein alignment of members of the “retrotrans_gag 2” family (LTR retrotransposons). Monophyletic clades containing genes from V. vinifera ‘PN40024’ and V. riparia ‘Manitoba 37’ were annotated and the node containing the most recent common ancestor was indicated by black triangle. Gene id and group are found in Supplementary Table 7f. d Protein alignment of LOB Domain containing (LBD) family proteins, bootstrap values are at nodes. Gene id and group are found in Supplementary Table 7g
