Table 2 Key lncRNAs identified in this study that are related to heat response in Chinese cabbage

From: Comparative analysis of long noncoding RNAs in angiosperms and characterization of long noncoding RNAs in response to heat stress in Chinese cabbage

lncRNA_ID

Potential target genes

Number of potential target genes

Activity modea

LNC_007838

HSPs and HSP-related genes

21

cis or trans

LNC_016696

HSPs and HSP-related genes

21

cis or trans

LNC_010992

HSPs and HSP-related genes

17

trans

LNC_003028

HSPs and HSP-related genes

16

trans

LNC_005395

HSPs and HSP-related genes

13

trans

LNC_009853

HSPs and HSP-related genes

13

trans

LNC_003977

HSPs and HSP-related genes

11

trans

LNC_005895

HSPs and HSP-related genes

11

cis or trans

LNC_006136

HSPs and HSP-related genes

11

trans

LNC_007840

HSPs and HSP-related genes

7

cis or trans

LNC_015255

HSPs

7

cis or trans

LNC_004890

PYR/PYLs

6

trans

LNC_005790

PYR/PYLs

6

trans

LNC_005338

PYR/PYLs

5

trans

LNC_005590

PYR/PYLs

5

trans

LNC_017421

PYR/PYLs

5

trans

LNC_001877

PYR/PYLs

4

trans

LNC_006162

PYR/PYLs

4

trans

LNC_006421

PYR/PYLs

4

trans

LNC_011542

PYR/PYLs

4

trans

LNC_010992

clpB1

1

cis

LNC_013535

DHR18

1

cis

LNC_000609

slu7

1

cis

LNC_002021

MLP-like genes

1

cis

LNC_000283

MLP-like genes

1

cis

LNC_014195

MLP-like genes

1

cis

  1. aFor trans-acting mode, lncRNAs that might regulate more than ten HSP genes and more than three PYR/PYL genes were selected.