Table 4 Differentially expressed genes based on various comparisons

From: Integration of early disease-resistance phenotyping, histological characterization, and transcriptome sequencing reveals insights into downy mildew resistance in impatiens

Comparison

Upregulated

Downregulated

Total

DOB cotyledon

S

vs

DOB-true leaf

R

2684

3019

5703

FLR cotyledon

R

vs

FLR-true leaf

R

1072

1091

2163

SER cotyledon

S

vs

SER-true leaf

S

977

873

1850

DOB cotyledon

S

vs

FLR cotyledon

R

1360

1337

2697

SER cotyledon

S

vs

FLR cotyledon

R

8592

7676

16,268

SER-true leaf

S

vs

DOB-true leaf

R

8461

7510

15,971

SER-true leaf

S

vs

FLR-true leaf

R

9111

7828

16,939

  1. DOB I. hawkeri Divine Orange Bronze Leaf, FLR I. hawkeri Florific Lavender, SER I. walleriana Super Elfin Red. All comparisons have FDR < 0.05 and fold change ≥ 2. “S” indicates susceptibility to impatiens downy mildew; “R” indicates resistance to impatiens downy mildew
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