Fig. 3: Genomic map with identity plots of a 54-kb deletion (purple box) between HLA-G and HLA-A in the 59_HLA24C01 haplotype sequence compared to the aligned sequences of the GR_HLA-A03C07, 27_A01C07 and 20_A02C12 haplotypes listed on the left side of the figure. | Human Genome Variation

Fig. 3: Genomic map with identity plots of a 54-kb deletion (purple box) between HLA-G and HLA-A in the 59_HLA24C01 haplotype sequence compared to the aligned sequences of the GR_HLA-A03C07, 27_A01C07 and 20_A02C12 haplotypes listed on the left side of the figure.

From: Human leukocyte antigen super-locus: nexus of genomic supergenes, SNPs, indels, transcripts, and haplotypes

Fig. 3

The locations of HLA-H, HLA-T, HLA-K pseudogenes (labelled green boxes) HLA-A (horizontal arrow) and some TE are indicated on the GR_A03C07 sequence. The yellow box labelled C9 represents Charlie9. The location of the intact telomeric HLA-G gene and the deleted pseudogene HLA-U centromeric of HLA-K are not shown. All interspersed repeats in the upper sequence are indicated with the symbols used by Kulski et al.13.

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