Table 2 The significant m6A-SNPs for SBP in GWAS-2018

From: Examination of the associations between m6A-associated single-nucleotide polymorphisms and blood pressure

SNP rsID

Gene

CHR

Positiona

EA

EAF

GWAS

eQTL effect

Confidence level

m6A functionc

β SBP

P SBP

β CAD

P CAD

β stroke

P stroke

Asianb

rs56001051

C1orf167

1

11,838,841

G

0.10

−0.0378

1.49E − 21

Yes

cis

Low

Gain

rs715

CPS1

2

211,543,055

C

0.29

−0.0155

5.67E − 09

–-

No

trans

Low

Loss

rs1733860

PODXL

7

131,185,995

A

0.36

0.0160

1.70E − 10

No

trans

Low

Gain

rs9657518

RP1L1

8

10,467,589

C

0.34

0.0160

2.89E − 08

Yes

trans

Low

Gain

rs4639

NEIL2

8

11,644,751

G

0.41

0.0160

1.03E − 10

No

cis

Low

Gain

rs1801253

ADRB1

10

115,805,056

C

0.34

0.0182

9.24E − 11

No

cis

Low

Loss

rs3758911

CWF19L2

11

107,197,640

C

0.32

0.0142

4.28E − 08

No

cis

Low

Gain

rs7398833

CUX2

12

111,786,892

C

0.24

−0.0201

7.33E −12

−0.0344

1.22E−03

−0.0431

1.78E−05

No

trans

Low

Gain

rs1885986

SMG6

17

2,203,175

G

0.34

−0.0173

2.07E − 11

No

cis

Medium

Loss

rs17650901

MAPT

17

44,039,691

G

0.23

−0.0168

9.87E − 09

No

cis

Low

Loss

rs1881193

KANSL1

17

44,248,769

C

0.23

−0.0169

8.73E − 09

No

trans

Medium

Loss

rs197922

GOSR2

17

45,008,570

A

0.35

0.0166

1.30E − 10

0.0313

9.70E − 04

Yes

cis

Low

Loss

rs740406

DOT1L

19

2,232,221

G

0.07

0.0295

2.79E − 08

−0.0381

3.03E − 02

Yes

cis

Low

Gain

  1. m6A-SNP N6-methyladenosine-associated single-nucleotide polymorphisms, GWAS genome-wide association studies, CAD coronary artery disease, CHR chromosome, DBP diastolic blood pressure, EA effect allele, EAF effect allele frequency, eQTL expression quantitative locus, SBP systolic blood pressure, SE standard error, SNP single-nucleotide polymorphism
  2. aAssembly: GRCh37.p13
  3. bWhether the BP association has been replicated in East Asians
  4. cThe effect alleles may result in loss or gain of m6A sites