Fig. 2 | Nature Communications

Fig. 2

From: The interdependent network of gene regulation and metabolism is robust where it needs to be

Fig. 2

Sketch of the propagation dynamics of a single-vertex perturbation. The perturbation in the small sample three-domain organized network with gene regulatory domain (top, green), (protein-)interface (middle, blue) and metabolic domain (bottom, red) is initiated in vertex 0 and spreads according to the percolation model given in Eqs. (1) and (2). The numbers and the grayscale indicate the time step in which the respective vertex has been turned off; black vertices are not affected. The arrow line styles denote the three logical categories of edges: C: curly, D: solid, and R: dashed. In the subsequent steps of the analysis, we consider the largest weakly connected component of the frozen network state (vertices in the dark area). A more detailed illustration is given in Supplementary Fig. 7

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