Table 1 Summary of activity assays on different substrates

From: Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates

Polysaccharide

LsAA9A

CvAA9A

 

Activity

Notes

Activity

Notes

Cellulose and cello-oligosaccharides

++

Activity on both cellulose oligosaccharides and insoluble cellulose material (PASC)

++

Activity on both cellulose oligosaccharides and insoluble cellulose material (PASC)

MLG

++

Pattern suggests β-(1 → 3) bonds accommodated at specific places within active site, but not between −1 and +1

++

Pattern suggests β-(1 → 3) bonds accommodated at specific places within active site, but not between −1 and +1

Glucomannan and Man6

++

Cleavage can occur with Glc or mannose at −1 or +1. Inactivity on Man6 indicates some Glc C2 hydroxyl orientation needs to be present between −3 and +3

++

Cleavage can occur with Glc or mannose at −1 or +1. Inactivity on Man6 indicates some Glc C2 hydroxyl orientation needs to be present between −3 and +3

Xyloglucan

++

Cleavage occurs with unsubstituted Glc at subsite +1. Xylosyl substitution at −3, −2, −1, +2 and +3. Galactosyl-xylosyl substitutions can occur at either −2, −1 and/or +3

++

Cleavage occurs with unsubstituted Glc at subsite +1. Xylosyl substitution at −3, −2, −1, +2 and +3. Galactosyl-xylosyl substitutions can occur at either −2, −1 and/or +3

Xylan and Xyl6

+

Activity on both. Weak Xyl6 activity compared to Cell6 suggests that, while Glc C6 is not required for activity, it is very important at certain sites, such as +1

+/–

Much poorer activity of CvAA9A compared with LsAA9A

Starch

Absence of activity indicates that LsAA9A necessarily cleaves β-(1 → 4) bonds

Absence of activity indicates that CvAA9A necessarily cleaves β-(1 → 4) bonds

Laminarin

 

 

G4G3G4G (MLG oligosaccharide)

 

 

Chitin

Absence of activity indicates that LsAA9A either requires O2 interactions or cannot accommodate N-acetyl on amino C2

Absence of activity indicates that CvAA9A either requires O2 interactions or cannot accommodate N-acetyl on amino C2

  1. Semi-quantitative activity results summarising the activity of LsAA9A and CvAA9A on the range of different substrates used in this manuscript. All experiments were carried out in at least triplicate