Fig. 6 | Nature Communications

Fig. 6

From: Estimation of immune cell content in tumour tissue using single-cell RNA-seq data

Fig. 6

Estimates of cellular composition by three different methods. Three ovarian cancer ascites samples were profiled by single-cell and bulk RNA sequencing, as well as FACS. a Process diagram of data and results generation for three ovarian cancer ascites samples. b Estimates of the cellular composition are derived by: (1) classification based on single-cell RNA sequencing data; (2) computational deconvolution on the bulk RNA sequencing data using the single-cell RNA sequencing derived RGEP3; (3) quantification by FACS. For sample 7892, macrophages/monocytes quantification could not be determined by FACS

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