Fig. 6
From: Evolution of gene knockout strains of E. coli reveal regulatory architectures governed by metabolism
Overview of mutation statistics. See Supplementary Data 6 for detailed statistics of each category and categories not shown. a The type of mutation. Mutations include amplification (AMP), deletion (DEL), insertions (INS), mobile element aided insertions or deletions (MOB), single nucleotide polymorphism (SNP). b The location of the mutation. Locations include coding regions, regions associated with cryptic prophages, intergenic regions, regions two coding genes not classified as an intergenic region (intergenic/intergenic), and repetitive elements (REP or RIP). c The class of mutation. Classes include frameshifts, frameshifts resulted in a truncated CDS, missense, non-frameshifts, peptide truncations, and other unclassified mutations. d The functional or structural category of the mutated gene. Categories are based on the “parent class” as found in the EcoCyc database103
