Table 1 Number of identified proteins and peptides in each sample type and distribution among the three protein categories
From: Quantitative metaproteomics of medieval dental calculus reveals individual oral health status
Bacteria | Human | Other | Total | |
|---|---|---|---|---|
Tjærby (n = 22) | ||||
PSM | 221,063 | |||
Peptides, total | 28,265 | 2685 | 107 | 31,044 |
Peptides, median (std) | 4343 (±2147) | 611 (±184) | 23 (±11) | 4930 (±2281) |
Proteins, total | 3454 | 205 | 12 | 3671 |
Proteins, median (std) | 781 (±392) | 69 (±18) | 4 (±1) | 854 (±404) |
Modern plaque (n = 7) | ||||
PSM | 106,830 | |||
Peptides, total | 18,607 | 7940 | 1880 | 28,023 |
Peptides, median (std) | 5494 (±2146) | 3869 (±981) | 784 (±255) | 9846 (±2554) |
Proteins, total | 2510 | 496 | 180 | 3186 |
Proteins, median (std) | 952 (±316) | 312 (±63) | 111 (±29) | 1432 (±336) |
Modern calculus (n = 6) | ||||
PSM | 153,017 | |||
Peptides, total | 36,108 | 9273 | 2317 | 47,422 |
Peptides, median (std) | 10,510 (±2392) | 2987 (±1829) | 609 (±503) | 14,928 (±1493) |
Proteins, total | 3665 | 493 | 210 | 4368 |
Proteins, median (std) | 1335 (±357) | 298 (±90) | 87 (±39) | 1834 (±322) |
